Difference between revisions of "Team:TUDelft/Attributions"

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<h3>★  ALERT! </h3>
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<div class="Banner container-fluid text-center mb-0 align-items-center ">
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<p>This page is used by the judges to evaluate your team for the <a href="https://2019.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2019.igem.org/Judging/Awards"> award listed below</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2019.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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<div class="display-2 mb-0">  
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<br>
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<br>
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<img class="banneroh" src = "https://static.igem.org/mediawiki/2019/0/07/T--TUDelft--Attributions_logo.png" alt="Attributions" >
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</div>          
 
</div>
 
</div>
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</div>
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<div class="protocol centerjustify">
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<p> This page is dedicated to <b style="color:#0072B2; font-size:x-large;">everyone who helped us and believed in our project</b>. During our project we have received a lot of advice and support from our supervisors, stakeholders, sponsors and specialists. While all of the practical work has been performed by our team, our project would not have been possible without all of these people. We also have a special page for all our <a href="https://2019.igem.org/Team:TUDelft/Sponsors" target="_blank" ><b>sponsors</b></a>, who helped us financially to achieve our goals.
 +
</p>
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<br>
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<br>
  
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<table id="tabletu">   
 +
<caption style="text-align:left;"><b> Table 1: Team Member attributions </b></caption>
 +
                            <tr>
 +
                                <th>Name</th>
 +
                                <th>Manager Role </th>
 +
                                <th>Involved in</th>
 +
         
 +
                            </tr>
  
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<div class="clear"></div>
 
  
 +
                            <tr>
 +
                                <td>Hafsa Akaouche </td>
 +
                                <td>Sponsoring </td>
 +
                                <td>Orthogonal Replication</td>
 +
                           
 +
                            </tr>
  
 +
                            <tr>
 +
                                <td>Joel Clotet i Peretó </td>
 +
                                <td>Human Practices </td>
 +
                                <td></td>
 +
               
 +
                            </tr>
  
 +
                            <tr>
 +
                                <td>Osman Esen </td>
 +
                                <td>Finance </td>
 +
                                <td>Sponsoring, Codon Harmonization & Human Practices  </td>
 +
                                     
 +
                            </tr>
 +
  <tr>
 +
                                <td>Sagarika Govindaraju</td>
 +
                                <td>Lab</td>
 +
                                <td>Transferable and Controllable Expression, Human Practices & Presentation</td>
 +
                                           
 +
                            </tr>
 +
                            <tr>
 +
                                <td>Esther Hoogerwerf </td>
 +
                                <td>Safety, Collaboration & Secretary </td>
 +
                                <td>Orthogonal Replication, Human Practices & Presentation </td>
 +
                                           
 +
                            </tr>
  
 +
                            <tr>
 +
                                <td>Weronika Hoska van Aken </td>
 +
                                <td>Data </td>
 +
                                <td>Orthogonal Replication & Wiki</td>
 +
                     
 +
                            </tr>
  
 +
                            <tr>
 +
                                <td>Dennis Kenbeek </td>
 +
                                <td>Modeling </td>
 +
                                <td>Collaboration, Transferable and Controllable Expression & Codon Harmonization </td>
  
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<div class="column full_size">
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                            </tr>
−
<h1>Attributions</h1>
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−
<p>This page is your opportunity to explain what parts of your project you did and what was done by technicians, advisers, etc. This requirement is not about literature references - these can and should be displayed throughout your wiki.
+
                            <tr>
 +
                                <td>Mu-En Lu </td>
 +
                                <td>Global Meeting Point </td>
 +
                                <td> </td>
 +
                 
 +
                            </tr>
 +
 
 +
                            <tr>
 +
                                <td>Huyen My Nguyen </td>
 +
                                <td>Wiki and Team Captain since August</td>
 +
                                <td>Sponsoring & Orthogonal Replication</td>
 +
 
 +
                            </tr>
 +
 
 +
                            <tr>
 +
                                <td>Marco Valentim Becker </td>
 +
                                <td>Science </td>
 +
                                <td>Transferable and Controllable Expression & Modeling  </td>
 +
 
 +
                            </tr>
 +
 
 +
                            <tr>
 +
                                <td>Renée van der Winden </td>
 +
                                <td>Team Captain until August </td>
 +
                                <td>Sponsoring  </td>
 +
       
 +
                            </tr>
 +
                           
 +
                        </table>
 +
 
 +
<br>
 +
<br>
 +
 
 +
<ul class="accordion">
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>Principal Investigators</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> Dr. Timon Idema <br>
 +
Dr. Christophe Danelon
 
</p>
 
</p>
 +
</div>
 +
</li>
  
−
<h3> Bronze Medal Criterion #3</h3>
+
<li>
−
<p> All of the work done in your project must be attributed correctly on this page. You must clearly state the work that was done by the students on your team and note any work that was done by people outside of your team, including the host labs, advisors, instructors, and individuals not on the team roster.  
+
<a class="toggle" href="javascript:void(0);" ><b>Supervisors</b><span style="float:right;"><b>&#xfe40;</b></span></a>
−
<br><br>
+
<div class="inner">
−
Please see the <a href="https://2019.igem.org/Judging/Medals">Medals requirements page</a> for more details.</p>
+
<p>
 +
Dr. Zoë Robaey<br>
 +
Dr. David Foschepoth<br>
 +
Britte Bouchaut <br>
 +
Elisa Godino<br>
 +
Charlotte Koster<br>
 +
Esengül Yildirim
 +
</p>
 
</div>
 
</div>
 +
</li>
  
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>General Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>BN Secretaries</b><br>
 +
For helping with booking rooms for our endless meetings, sending packages and, of course, for giving us our iGEM coffee card.<br>
 +
<br>
 +
<b>Lenny Bakker</b><br>
 +
For coaching us during the media training at TU Delft and for giving feedback on important publications.<br>
 +
<br>
  
−
<div class="clear extra_space"></div>
+
<b>Mark van Pappelendam, Jasper van Heusde and Diana Traub-Stacey</b><br>
 +
For helping us staying on track with our finances.
 +
</p>
 +
</div>
 +
</li>
  
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>Wet Lab Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>Susanne Hage</b><br>
 +
For helping with the lab equipment and safety evaluations.<br>
 +
<br>
 +
<b>Jan Wignand and Anke Amweg Welter</b><br>
 +
For always providing us with autoclaved materials and for bringing a lot of our packages.
 +
<br>
 +
<br>
  
 +
<b>Dr. Cristóbal Almendros Romero and Sebastian Kieper</b><br>
 +
For familiarizing us how to use the electroporation machine.
 +
<br>
 +
<br>
 +
<b>Dr. David Foschepoth</b><br>
 +
For developing a mass spectrometry method for the phi29 proteins and confirming that the phi29 proteins are produced.<br>
 +
<br>
 +
<b>Elisa Godino</b><br>
 +
For familiarizing us with conducting IVTT experiments.<br>
 +
<br>
  
−
<div class="column third_size">
+
<b>Duco Blanken</b><br>
−
<h3> What should this page contain?</h3>
+
For familiarizing us with IVTT kinetics.<br>
 +
<br>
  
−
<ul>
+
 
−
<li>Clearly state what the team accomplished</li>
+
<b>Dr. Zhanar Abil and Diederik Laman Trip</b><br>
−
<li>General Support</li>
+
For helping us doing our Flow Cytometry experiments.<br>
−
<li>Project support and advice</li>
+
<br>
−
<li>Fundraising help and advice</li>
+
 
−
<li>Lab support</li>
+
 
−
<li>Difficult technique support</li>
+
<b>Ana Restrepo</b><br>
−
<li>Project advisor support</li>
+
For helping us with our in vitro replication experiments.
−
<li>Wiki support</li>
+
 
−
<li>Presentation coaching</li>
+
</p>
−
<li>Human Practices support</li>
+
−
<li> Thanks and acknowledgements for all other people involved in helping make a successful iGEM team</li>
+
−
</ul>
+
 
</div>
 
</div>
 +
</li>                 
  
−
<div class="column third_size">
+
<li>
−
<p>Tell us if your institution teaches an iGEM or synthetic biology class and when you started your project:</p>
+
<a class="toggle" href="javascript:void(0);" ><b>Dry Lab Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
−
<ul>
+
<div class="inner">
−
<li>Does your institution teach an iGEM or synthetic biology course?</li>
+
<p> <b>Anne Doerr</b><br>
−
<li>When did you start this course?</li>
+
For giving us tips and feedback on our initial model.
−
<li>Are the syllabus and course materials freely available online?</li>
+
 
−
<li>When did you start your brainstorming?</li>
+
 
−
<li>When did you start in the lab?</li>
+
 
−
<li>When did you start working on your project?</li>
+
</p>
−
</ul>
+
 
</div>
 
</div>
 +
</li>                     
  
 +
<li>
 +
<a class="toggle" href="javascript:void(0);"><b>Human Practices Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>Korienke Smit (RIVM) </b><br>
 +
For giving us inside and feedback on our safe-by-design infographic.
 +
<br>
 +
<br>
 +
<b>Everyone who filled in our survey</b><br>
 +
Thereby gave us a good view on the impact of our project.
 +
<br>
 +
<br>
 +
<b>Ines Kaal</b><br>
 +
For being our contact person for our blog on biotechnologie.com.
 +
<br>
 +
<br>
 +
<b>International Student Chaplaincy</b><br>
 +
For collaboration on hosting the Global Meeting Point.
 +
<br>
 +
<br>
 +
<b>Marijn van der Brink</b><br>
 +
For being our co-presentator at the Boerhaave museum.
  
−
<div class="column third_size">
 
−
<div class="highlight decoration_A_full">
 
  
−
<h3>Inspiration</h3>
+
</p>
−
<p>Take a look at what other teams have done:</p>
+
−
<ul>
+
−
<li><a href="https://2011.igem.org/Team:Imperial_College_London/Team">2011 Imperial College London</a> (scroll to the bottom)</li>
+
−
<li><a href="https://2014.igem.org/Team:Exeter/Attributions">2014 Exeter </a></li>
+
−
<li><a href="https://2014.igem.org/Team:Melbourne/Attributions">2014 Melbourne </a></li>
+
−
<li><a href="https://2014.igem.org/Team:Valencia_Biocampus/Attributions">2014 Valencia Biocampus</a></li>
+
−
</ul>
+
 
</div>
 
</div>
 +
</li>         
 +
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>Integrated Human Practices</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>Marjolein Engels</b><br>
 +
For giving us valuable feedback on the nature of microplastics and the currently existing methods to retrieve them from the environment.<br>
 +
<br>
 +
<b>Prof. Neelke Doorn</b><br>
 +
For giving us insights in the ethical issues around the valorisation of wastewater.<br>
 +
<br>
 +
 +
<b>Paul Roeleveld</b><br>
 +
For sharing his knowledge about how microplastics are filtered out of the water.<br>
 +
 +
</p>
 
</div>
 
</div>
 +
</li>
  
 +
     
  
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>Scientific Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>Cécile van der Vlugt-Bergmans (RIVM)</b><br>
 +
For giving us insights about the potential environmental impact of our project (self-replicating plasmids).
 +
<br>
 +
<br>
 +
<b>Dr. Jean-Marc Daran</b><br>
 +
For telling us about the need for a tool to characterize genes and pointing out the challenges we may face with our design.
 +
<br>
 +
<br>
 +
<b>Prof. Pascale Daran-Lapujade</b><br>
 +
For informing us about copy number control.
 +
<br>
 +
<br>
  
−
<div class="clear extra_space"></div>
+
<b>Prof. Mark van Loosdrecht</b><br>
 +
For telling us about microbes worthy of research and the possible environmental impact of our project.<br>
 +
<br>
  
−
<div class="column two_thirds_size">
+
<b>Dr. Bertus Beaumont</b><br>
−
<h3> Why is this page needed? </h3>
+
For providing us with new insights about directed evolution.
−
<p>The Attribution requirement helps the judges know what you did yourselves and what you had help with. We don't mind if you get help with difficult or complex techniques, but you must report what work your team did and what work was done by others.</p>
+
<br>
−
<p>
+
<br>
−
For example, you might choose to work with an animal model during your project. Working with animals requires getting a license and applying far in advance to conduct certain experiments in many countries. This is difficult to achieve during the course of a summer, but much easier if you can work with a postdoc or PI who has the right licenses.</p>
+
<b>Prof. Jack Pronk</b><br>
 +
For informing us that different bacterial species have a different codon usage and how important it is to have control over expression.
 +
<br>
 +
<br>
 +
<b>Dr. Aljoscha Wahl</b><br>
 +
For giving insight into the modeling and for providing us with names of possible stakeholders.
 +
<br>
 +
<br>
 +
 
 +
<b>Dr. Duncan McMillan</b><br>
 +
For telling us about broad-host-range plasmids and inspiring us to collaborate with labs to prove our system.<br>
 +
<br>
 +
<b>Dr. Megan Palmer</b><br>
 +
For pointing out possible problems with surveys and suggesting more effective ways of contacting people.
 +
<br>
 +
<br>
 +
<b>Prof. Chang Liu</b><br>
 +
For telling us about the problems with phi29 and giving us possible alternative directions.
 +
<br>
 +
<br>
 +
<b>Dr. Sara Mitri</b><br>
 +
For discussing with us how our product can help her research.
 +
<br>
 +
<br>
 +
 
 +
<b>Prof. Richard van Kranenburg</b><br>
 +
For telling us about the challenges in the bioprocess industry, pointing out the problems we may encounter, and suggesting to check the Standard European Vector Architecture (SEVA) platform.<br>
 +
<br>
 +
 
 +
<b>Dr. Terry Hazen</b><br>
 +
For telling us about interesting enzymes to put on our plasmid and suggesting possible applications of our project.
 +
<br>
 +
<br>
 +
<b>Dr. Julian Willis</b><br>
 +
For giving us his expert opinion on the replication machinery of the Φ29 bacteriophage.
 +
<br>
 +
<br>
 +
<b> Prof. Roel Bovenberg, Prof. Henk Noorman, Dr. Marcus Remmers, Dr. Hans Roubos and Wim Klop</b>
 +
<br>
 +
For giving us a chance to present our project to DSM at TU Delft and giving feedback on applications and safety.
 +
 
 +
<br>
 +
<br>
 +
 
 +
<b>Prof. Daniel Gibson and SGI-DNA</b><br>
 +
For providing us with the <i>Vibrio natriegens</i> (Vmax) strain and plasmid.<br>
 +
<br>
 +
<b>Dr. Cristóbal Almendros Romero</b><br>
 +
For providing us with <i>P. putida</i>.               
 +
 
 +
</p>
 
</div>
 
</div>
 +
</li>
  
−
<div class="column third_size">
+
<li>
−
<div class="highlight decoration_B_full">
+
<a class="toggle" href="javascript:void(0);"><b>Fundraising Help and Advice</b><span style="float:right;"><b>&#xfe40;</b></span></a>
−
<h3> Can we base our project on a previous one? </h3>
+
<div class="inner">
−
<p>Yes! You can have a project based on a previous team, or based on someone else's idea, <b>as long as you state this fact very clearly and give credit for the original project.</b> </p>
+
<p> <b>Dr. Stefania Usai</b><br>
 +
For helping us make our story clearer for the general public and advising us on how to approach companies.
 +
 
 +
</p>
 
</div>
 
</div>
 +
</li>
 +
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>Other</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>Sunnie van de Werken</b><br>
 +
For taking pictures of us. <br>
 +
<br>
 +
 +
<b> Charlotte Koster </b> <br>
 +
For taking pictures during the Foldscope event.
 +
<br>
 +
<br>
 +
<b> Dr. Michele Laureni and Ad Bergkamp </b> <br>
 +
For giving a talk about microscopes and the microbial world at the Foldscope event.
 +
<br>
 +
<br>
 +
<b> Olga Kleijn </b> <br>
 +
For allowing us to enjoy our Foldscope event at the science centre.
 +
<br>
 +
<br>
 +
<b> Lonneke Velds </b> <br>
 +
For promoting our Foldscope event
 +
<br>
 +
</p>
 
</div>
 
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</li>
  
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</ul>
  
  
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{{:Team:TUDelft/Footer}}

Latest revision as of 05:59, 14 December 2019

Sci-Phi 29

This page is dedicated to everyone who helped us and believed in our project. During our project we have received a lot of advice and support from our supervisors, stakeholders, sponsors and specialists. While all of the practical work has been performed by our team, our project would not have been possible without all of these people. We also have a special page for all our sponsors, who helped us financially to achieve our goals.



Table 1: Team Member attributions
Name Manager Role Involved in
Hafsa Akaouche Sponsoring Orthogonal Replication
Joel Clotet i Peretó Human Practices
Osman Esen Finance Sponsoring, Codon Harmonization & Human Practices
Sagarika Govindaraju Lab Transferable and Controllable Expression, Human Practices & Presentation
Esther Hoogerwerf Safety, Collaboration & Secretary Orthogonal Replication, Human Practices & Presentation
Weronika Hoska van Aken Data Orthogonal Replication & Wiki
Dennis Kenbeek Modeling Collaboration, Transferable and Controllable Expression & Codon Harmonization
Mu-En Lu Global Meeting Point
Huyen My Nguyen Wiki and Team Captain since August Sponsoring & Orthogonal Replication
Marco Valentim Becker Science Transferable and Controllable Expression & Modeling
Renée van der Winden Team Captain until August Sponsoring


  • Principal Investigators﹀

    Dr. Timon Idema
    Dr. Christophe Danelon

  • Supervisors﹀

    Dr. Zoë Robaey
    Dr. David Foschepoth
    Britte Bouchaut
    Elisa Godino
    Charlotte Koster
    Esengül Yildirim

  • General Support﹀

    BN Secretaries
    For helping with booking rooms for our endless meetings, sending packages and, of course, for giving us our iGEM coffee card.

    Lenny Bakker
    For coaching us during the media training at TU Delft and for giving feedback on important publications.

    Mark van Pappelendam, Jasper van Heusde and Diana Traub-Stacey
    For helping us staying on track with our finances.

  • Wet Lab Support﹀

    Susanne Hage
    For helping with the lab equipment and safety evaluations.

    Jan Wignand and Anke Amweg Welter
    For always providing us with autoclaved materials and for bringing a lot of our packages.

    Dr. Cristóbal Almendros Romero and Sebastian Kieper
    For familiarizing us how to use the electroporation machine.

    Dr. David Foschepoth
    For developing a mass spectrometry method for the phi29 proteins and confirming that the phi29 proteins are produced.

    Elisa Godino
    For familiarizing us with conducting IVTT experiments.

    Duco Blanken
    For familiarizing us with IVTT kinetics.

    Dr. Zhanar Abil and Diederik Laman Trip
    For helping us doing our Flow Cytometry experiments.

    Ana Restrepo
    For helping us with our in vitro replication experiments.

  • Dry Lab Support﹀

    Anne Doerr
    For giving us tips and feedback on our initial model.

  • Human Practices Support﹀

    Korienke Smit (RIVM)
    For giving us inside and feedback on our safe-by-design infographic.

    Everyone who filled in our survey
    Thereby gave us a good view on the impact of our project.

    Ines Kaal
    For being our contact person for our blog on biotechnologie.com.

    International Student Chaplaincy
    For collaboration on hosting the Global Meeting Point.

    Marijn van der Brink
    For being our co-presentator at the Boerhaave museum.

  • Integrated Human Practices﹀

    Marjolein Engels
    For giving us valuable feedback on the nature of microplastics and the currently existing methods to retrieve them from the environment.

    Prof. Neelke Doorn
    For giving us insights in the ethical issues around the valorisation of wastewater.

    Paul Roeleveld
    For sharing his knowledge about how microplastics are filtered out of the water.

  • Scientific Support﹀

    Cécile van der Vlugt-Bergmans (RIVM)
    For giving us insights about the potential environmental impact of our project (self-replicating plasmids).

    Dr. Jean-Marc Daran
    For telling us about the need for a tool to characterize genes and pointing out the challenges we may face with our design.

    Prof. Pascale Daran-Lapujade
    For informing us about copy number control.

    Prof. Mark van Loosdrecht
    For telling us about microbes worthy of research and the possible environmental impact of our project.

    Dr. Bertus Beaumont
    For providing us with new insights about directed evolution.

    Prof. Jack Pronk
    For informing us that different bacterial species have a different codon usage and how important it is to have control over expression.

    Dr. Aljoscha Wahl
    For giving insight into the modeling and for providing us with names of possible stakeholders.

    Dr. Duncan McMillan
    For telling us about broad-host-range plasmids and inspiring us to collaborate with labs to prove our system.

    Dr. Megan Palmer
    For pointing out possible problems with surveys and suggesting more effective ways of contacting people.

    Prof. Chang Liu
    For telling us about the problems with phi29 and giving us possible alternative directions.

    Dr. Sara Mitri
    For discussing with us how our product can help her research.

    Prof. Richard van Kranenburg
    For telling us about the challenges in the bioprocess industry, pointing out the problems we may encounter, and suggesting to check the Standard European Vector Architecture (SEVA) platform.

    Dr. Terry Hazen
    For telling us about interesting enzymes to put on our plasmid and suggesting possible applications of our project.

    Dr. Julian Willis
    For giving us his expert opinion on the replication machinery of the Φ29 bacteriophage.

    Prof. Roel Bovenberg, Prof. Henk Noorman, Dr. Marcus Remmers, Dr. Hans Roubos and Wim Klop
    For giving us a chance to present our project to DSM at TU Delft and giving feedback on applications and safety.

    Prof. Daniel Gibson and SGI-DNA
    For providing us with the Vibrio natriegens (Vmax) strain and plasmid.

    Dr. Cristóbal Almendros Romero
    For providing us with P. putida.

  • Fundraising Help and Advice﹀

    Dr. Stefania Usai
    For helping us make our story clearer for the general public and advising us on how to approach companies.

  • Other﹀

    Sunnie van de Werken
    For taking pictures of us.

    Charlotte Koster
    For taking pictures during the Foldscope event.

    Dr. Michele Laureni and Ad Bergkamp
    For giving a talk about microscopes and the microbial world at the Foldscope event.

    Olga Kleijn
    For allowing us to enjoy our Foldscope event at the science centre.

    Lonneke Velds
    For promoting our Foldscope event