Difference between revisions of "Team:TUDelft/Attributions"

 
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<p> This page is dedicated to <b style="color:#0072B2; font-size:x-large;">everyone who helped us and believed in our project</b>. During our project we have received a lot of advice and support from our supervisors, stakeholders, sponsors and specialists. While all of the practical work has been performed by our team, our project would not have been possible without all of these people. We also have a special page for all our <a href="https://2019.igem.org/Team:TUDelft/Sponsors" target="_blank" ><b>sponsors</b></a>, who helped us financially to achieve our goals.
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<caption style="text-align:left;"><b> Table 1: Team Member attributions </b></caption>
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                                <th>Name</th>
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                                <th>Manager Role </th>
 +
                                <th>Involved in</th>
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                                <td>Hafsa Akaouche </td>
 +
                                <td>Sponsoring </td>
 +
                                <td>Orthogonal Replication</td>
 +
                           
 +
                            </tr>
  
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                                <td>Joel Clotet i Peretó </td>
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                                <td>Human Practices </td>
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                                <td></td>
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                            </tr>
  
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                                <td>Osman Esen </td>
 +
                                <td>Finance </td>
 +
                                <td>Sponsoring, Codon Harmonization & Human Practices  </td>
 +
                                     
 +
                            </tr>
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  <tr>
 +
                                <td>Sagarika Govindaraju</td>
 +
                                <td>Lab</td>
 +
                                <td>Transferable and Controllable Expression, Human Practices & Presentation</td>
 +
                                           
 +
                            </tr>
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                            <tr>
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                                <td>Esther Hoogerwerf </td>
 +
                                <td>Safety, Collaboration & Secretary </td>
 +
                                <td>Orthogonal Replication, Human Practices & Presentation </td>
 +
                                           
 +
                            </tr>
  
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                                <td>Weronika Hoska van Aken </td>
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                                <td>Data </td>
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                                <td>Orthogonal Replication & Wiki</td>
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                                <td>Dennis Kenbeek </td>
 +
                                <td>Modeling </td>
 +
                                <td>Collaboration, Transferable and Controllable Expression & Codon Harmonization </td>
  
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                            </tr>
  
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                                <td>Mu-En Lu </td>
 +
                                <td>Global Meeting Point </td>
 +
                                <td> </td>
 +
                 
 +
                            </tr>
  
 +
                            <tr>
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                                <td>Huyen My Nguyen </td>
 +
                                <td>Wiki and Team Captain since August</td>
 +
                                <td>Sponsoring & Orthogonal Replication</td>
  
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                                <td>Marco Valentim Becker </td>
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                                <td>Science </td>
 +
                                <td>Transferable and Controllable Expression & Modeling  </td>
 +
 
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                            </tr>
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                            <tr>
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                                <td>Renée van der Winden </td>
 +
                                <td>Team Captain until August </td>
 +
                                <td>Sponsoring  </td>
 +
       
 +
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<p> Our project could not have been achieved if it was not because of these people. During our project we have received a lot of advice from our supervisors, stakeholders, sponsors and specialists. While all of the practical work has been performed by the team the execution would not have been possible without all these people. This page is dedicated to everyone who helped us and believed in our project. We also have a special page for all our <a href="https://2019.igem.org/Team:TUDelft/Sponsors"><b>sponsors</b></a>, without whom this project financially would not be possible.
 
−
</p>
 
 
<br>
 
<br>
 
<br>
 
<br>
  
−
<ul>
+
<ul class="accordion">
 
<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);" ><b>Principal Investigators</b></a>
+
<a class="toggle" href="javascript:void(0);" ><b>Principal Investigators</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> Dr. Timon Idema <br>
 
<p> Dr. Timon Idema <br>
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<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);" ><b>Supervisors</b></a>
+
<a class="toggle" href="javascript:void(0);" ><b>Supervisors</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
−
<p> Esengül Yildrim <br>
+
<p>
 +
Dr. Zoë Robaey<br>
 
Dr. David Foschepoth<br>
 
Dr. David Foschepoth<br>
 +
Britte Bouchaut <br>
 
Elisa Godino<br>
 
Elisa Godino<br>
 
Charlotte Koster<br>
 
Charlotte Koster<br>
−
Dr. Zoë Robaey<br>
+
Esengül Yildirim
−
Britte Bouchaut
+
−
 
+
 
</p>
 
</p>
 
</div>
 
</div>
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<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);" ><b>General support</b></a>
+
<a class="toggle" href="javascript:void(0);" ><b>General Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> <b>BN Secretaries</b><br>
 
<p> <b>BN Secretaries</b><br>
−
For helping with booking rooms for our endless meetings, sending packages and of course for giving us our iGEM coffee card.<br>
+
For helping with booking rooms for our endless meetings, sending packages and, of course, for giving us our iGEM coffee card.<br>
 
<br>
 
<br>
 
<b>Lenny Bakker</b><br>
 
<b>Lenny Bakker</b><br>
−
For coaching us during the media training of TU Delft and for the feedback on important publications.<br>
+
For coaching us during the media training at TU Delft and for giving feedback on important publications.<br>
 
<br>  
 
<br>  
  
−
<b>Mark van Papelendam</b><br>
+
<b>Mark van Pappelendam, Jasper van Heusde and Diana Traub-Stacey</b><br>
−
For helping us staying on track with our finances.
+
For helping us staying on track with our finances.  
−
 
+
 
</p>
 
</p>
 
</div>
 
</div>
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<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);" ><b>Wet Lab support</b></a>
+
<a class="toggle" href="javascript:void(0);" ><b>Wet Lab Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> <b>Susanne Hage</b><br>
 
<p> <b>Susanne Hage</b><br>
 
For helping with the lab equipment and safety evaluations.<br>
 
For helping with the lab equipment and safety evaluations.<br>
 
<br>
 
<br>
−
<b>Jan and Anke</b><br>
+
<b>Jan Wignand and Anke Amweg Welter</b><br>
−
For always providing us with autoclaved materials and also for bringing a lot of our packages.
+
For always providing us with autoclaved materials and for bringing a lot of our packages.
 
<br>
 
<br>
 
<br>  
 
<br>  
  
−
<b>Sebastian Kieper</b><br>
+
<b>Dr. Cristóbal Almendros Romero and Sebastian Kieper</b><br>
−
For teaching us how to use the electroporation machine.
+
For familiarizing us how to use the electroporation machine.
 +
<br>
 +
<br>
 +
<b>Dr. David Foschepoth</b><br>
 +
For developing a mass spectrometry method for the phi29 proteins and confirming that the phi29 proteins are produced.<br>
 +
<br>
 +
<b>Elisa Godino</b><br>
 +
For familiarizing us with conducting IVTT experiments.<br>
 +
<br>
 +
 
 +
<b>Duco Blanken</b><br>
 +
For familiarizing us with IVTT kinetics.<br>
 +
<br>
 +
 
 +
 
 +
<b>Dr. Zhanar Abil and Diederik Laman Trip</b><br>
 +
For helping us doing our Flow Cytometry experiments.<br>
 +
<br>
 +
 
 +
 
 +
<b>Ana Restrepo</b><br>
 +
For helping us with our in vitro replication experiments.
  
 
</p>
 
</p>
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<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);" ><b>Dry Lab support</b></a>
+
<a class="toggle" href="javascript:void(0);" ><b>Dry Lab Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> <b>Anne Doerr</b><br>
 
<p> <b>Anne Doerr</b><br>
−
For giving us tips and feedback about our initial model.
+
For giving us tips and feedback on our initial model.
  
  
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<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);"><b>Human Practices support</b></a>
+
<a class="toggle" href="javascript:void(0);"><b>Human Practices Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> <b>Korienke Smit (RIVM) </b><br>
 
<p> <b>Korienke Smit (RIVM) </b><br>
−
...
+
For giving us inside and feedback on our safe-by-design infographic.
 
<br>
 
<br>
 
<br>
 
<br>
 
<b>Everyone who filled in our survey</b><br>
 
<b>Everyone who filled in our survey</b><br>
−
Thereby gave us a good view on...
+
Thereby gave us a good view on the impact of our project.  
 
<br>
 
<br>
 
<br>  
 
<br>  
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<br>
 
<br>
 
<br>  
 
<br>  
−
 
 
<b>International Student Chaplaincy</b><br>
 
<b>International Student Chaplaincy</b><br>
−
For collaboration of hosting Global Meeting Point.
+
For collaboration on hosting the Global Meeting Point.
 +
<br>
 +
<br>
 +
<b>Marijn van der Brink</b><br>
 +
For being our co-presentator at the Boerhaave museum.
 +
 
  
 
</p>
 
</p>
 
</div>
 
</div>
−
</li>                
+
</li>          
 +
 
 +
<li>
 +
<a class="toggle" href="javascript:void(0);" ><b>Integrated Human Practices</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 +
<div class="inner">
 +
<p> <b>Marjolein Engels</b><br>
 +
For giving us valuable feedback on the nature of microplastics and the currently existing methods to retrieve them from the environment.<br>
 +
<br>
 +
<b>Prof. Neelke Doorn</b><br>
 +
For giving us insights in the ethical issues around the valorisation of wastewater.<br>
 +
<br>
 +
 
 +
<b>Paul Roeleveld</b><br>
 +
For sharing his knowledge about how microplastics are filtered out of the water.<br>
 +
 
 +
</p>
 +
</div>
 +
</li>
 +
 
 +
     
  
 
<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);" ><b>Scientific support</b></a>
+
<a class="toggle" href="javascript:void(0);" ><b>Scientific Support</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> <b>Cécile van der Vlugt-Bergmans (RIVM)</b><br>
 
<p> <b>Cécile van der Vlugt-Bergmans (RIVM)</b><br>
−
For giving us insights on the potential environmental impact of our project (self-replicating plasmids).
+
For giving us insights about the potential environmental impact of our project (self-replicating plasmids).
 
<br>
 
<br>
 
<br>
 
<br>
−
<b>Dr. Jean Marc Daran</b><br>
+
<b>Dr. Jean-Marc Daran</b><br>
−
For telling us the need of tool to characterize genes, and pointing out the challenges we may face with our design.
+
For telling us about the need for a tool to characterize genes and pointing out the challenges we may face with our design.
 
<br>
 
<br>
 
<br>  
 
<br>  
 
<b>Prof. Pascale Daran-Lapujade</b><br>
 
<b>Prof. Pascale Daran-Lapujade</b><br>
−
...
+
For informing us about copy number control.
 
<br>
 
<br>
 
<br>  
 
<br>  
  
 
<b>Prof. Mark van Loosdrecht</b><br>
 
<b>Prof. Mark van Loosdrecht</b><br>
−
For telling us the microbes worthy of research and possible environmental impact.<br>
+
For telling us about microbes worthy of research and the possible environmental impact of our project.<br>
 
<br>
 
<br>
  
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<br>
 
<br>
 
<b>Prof. Jack Pronk</b><br>
 
<b>Prof. Jack Pronk</b><br>
−
...
+
For informing us that different bacterial species have a different codon usage and how important it is to have control over expression.
 
<br>
 
<br>
 
<br>  
 
<br>  
 
<b>Dr. Aljoscha Wahl</b><br>
 
<b>Dr. Aljoscha Wahl</b><br>
−
For giving insight into the modeling. He also provided us with names of possible stakeholders.
+
For giving insight into the modeling and for providing us with names of possible stakeholders.
 
<br>
 
<br>
 
<br>  
 
<br>  
  
 
<b>Dr. Duncan McMillan</b><br>
 
<b>Dr. Duncan McMillan</b><br>
−
For telling us about broad-host-range plasmids and inspiring us how we can collaborate with labs to prove our system.<br>
+
For telling us about broad-host-range plasmids and inspiring us to collaborate with labs to prove our system.<br>
 
<br>
 
<br>
 
<b>Dr. Megan Palmer</b><br>
 
<b>Dr. Megan Palmer</b><br>
−
For telling us the problem with survey we should avoid and suggesting more effective way of contacting people.
+
For pointing out possible problems with surveys and suggesting more effective ways of contacting people.
 
<br>
 
<br>
 
<br>
 
<br>
 
<b>Prof. Chang Liu</b><br>
 
<b>Prof. Chang Liu</b><br>
−
For telling us the problems with Phi29 and giving us possible directions.
+
For telling us about the problems with phi29 and giving us possible alternative directions.
 
<br>
 
<br>
 
<br>  
 
<br>  
 
<b>Dr. Sara Mitri</b><br>
 
<b>Dr. Sara Mitri</b><br>
−
For telling us how our product can help her research.
+
For discussing with us how our product can help her research.
 
<br>
 
<br>
 
<br>  
 
<br>  
  
 
<b>Prof. Richard van Kranenburg</b><br>
 
<b>Prof. Richard van Kranenburg</b><br>
−
For telling us the challenge in bioprocess industry, and pointing out the problems we may encounter, and suggesting us to check Standard European Vector Architecture (SEVA) platform.<br>
+
For telling us about the challenges in the bioprocess industry, pointing out the problems we may encounter, and suggesting to check the Standard European Vector Architecture (SEVA) platform.<br>
 
<br>
 
<br>
  
−
<b>Dr. Terry C. Hazen</b><br>
+
<b>Dr. Terry Hazen</b><br>
−
For telling us the interesting enzymes to put into our plasmid, and possible applications.
+
For telling us about interesting enzymes to put on our plasmid and suggesting possible applications of our project.
 
<br>
 
<br>
 
<br>
 
<br>
 
<b>Dr. Julian Willis</b><br>
 
<b>Dr. Julian Willis</b><br>
−
...
+
For giving us his expert opinion on the replication machinery of the Φ29 bacteriophage.
 
<br>
 
<br>
 
<br>  
 
<br>  
−
<b>Dr. Marcus Remmers, Wim Klop, Prof. Roel Bovenberg, Dr. Hans Roubos, Prof. Henk Noorman</b><br>
+
<b> Prof. Roel Bovenberg, Prof. Henk Noorman, Dr. Marcus Remmers, Dr. Hans Roubos and Wim Klop</b>
 +
<br>
 
For giving us a chance to present our project to DSM at TU Delft and giving feedback on applications and safety.
 
For giving us a chance to present our project to DSM at TU Delft and giving feedback on applications and safety.
  
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<b>Prof. Daniel Gibson and SGI-DNA</b><br>
 
<b>Prof. Daniel Gibson and SGI-DNA</b><br>
−
For providing us the Vmax strain and plasmid.<br>
+
For providing us with the <i>Vibrio natriegens</i> (Vmax) strain and plasmid.<br>
 
<br>
 
<br>
−
<b>Dr. Cristobal Almendros</b><br>
+
<b>Dr. Cristóbal Almendros Romero</b><br>
−
For providing us with <i>P. Putida </i>.                 
+
For providing us with <i>P. putida</i>.                 
  
 
</p>
 
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<li>
 
<li>
−
<a class="toggle" href="javascript:void(0);"><b>Fundraising Help and Advice</b></a>
+
<a class="toggle" href="javascript:void(0);"><b>Fundraising Help and Advice</b><span style="float:right;"><b>&#xfe40;</b></span></a>
 
<div class="inner">
 
<div class="inner">
 
<p> <b>Dr. Stefania Usai</b><br>
 
<p> <b>Dr. Stefania Usai</b><br>
−
for helping us make our story clearer to the general public and advising us how to approach companies.
+
For helping us make our story clearer for the general public and advising us on how to approach companies.
  
 
</p>
 
</p>
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<p> <b>Sunnie van de Werken</b><br>
 
<p> <b>Sunnie van de Werken</b><br>
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For taking pictures of us.
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For taking pictures of us. <br>
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<b> Charlotte Koster </b> <br>
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For taking pictures during the Foldscope event.
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<b> Dr. Michele Laureni and Ad Bergkamp </b> <br>
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For giving a talk about microscopes and the microbial world at the Foldscope event.
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<b> Olga Kleijn </b> <br>
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For allowing us to enjoy our Foldscope event at the science centre.
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<b> Lonneke Velds </b> <br>
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For promoting our Foldscope event
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Latest revision as of 05:59, 14 December 2019

Sci-Phi 29

This page is dedicated to everyone who helped us and believed in our project. During our project we have received a lot of advice and support from our supervisors, stakeholders, sponsors and specialists. While all of the practical work has been performed by our team, our project would not have been possible without all of these people. We also have a special page for all our sponsors, who helped us financially to achieve our goals.



Table 1: Team Member attributions
Name Manager Role Involved in
Hafsa Akaouche Sponsoring Orthogonal Replication
Joel Clotet i Peretó Human Practices
Osman Esen Finance Sponsoring, Codon Harmonization & Human Practices
Sagarika Govindaraju Lab Transferable and Controllable Expression, Human Practices & Presentation
Esther Hoogerwerf Safety, Collaboration & Secretary Orthogonal Replication, Human Practices & Presentation
Weronika Hoska van Aken Data Orthogonal Replication & Wiki
Dennis Kenbeek Modeling Collaboration, Transferable and Controllable Expression & Codon Harmonization
Mu-En Lu Global Meeting Point
Huyen My Nguyen Wiki and Team Captain since August Sponsoring & Orthogonal Replication
Marco Valentim Becker Science Transferable and Controllable Expression & Modeling
Renée van der Winden Team Captain until August Sponsoring


  • Principal Investigators﹀

    Dr. Timon Idema
    Dr. Christophe Danelon

  • Supervisors﹀

    Dr. Zoë Robaey
    Dr. David Foschepoth
    Britte Bouchaut
    Elisa Godino
    Charlotte Koster
    Esengül Yildirim

  • General Support﹀

    BN Secretaries
    For helping with booking rooms for our endless meetings, sending packages and, of course, for giving us our iGEM coffee card.

    Lenny Bakker
    For coaching us during the media training at TU Delft and for giving feedback on important publications.

    Mark van Pappelendam, Jasper van Heusde and Diana Traub-Stacey
    For helping us staying on track with our finances.

  • Wet Lab Support﹀

    Susanne Hage
    For helping with the lab equipment and safety evaluations.

    Jan Wignand and Anke Amweg Welter
    For always providing us with autoclaved materials and for bringing a lot of our packages.

    Dr. Cristóbal Almendros Romero and Sebastian Kieper
    For familiarizing us how to use the electroporation machine.

    Dr. David Foschepoth
    For developing a mass spectrometry method for the phi29 proteins and confirming that the phi29 proteins are produced.

    Elisa Godino
    For familiarizing us with conducting IVTT experiments.

    Duco Blanken
    For familiarizing us with IVTT kinetics.

    Dr. Zhanar Abil and Diederik Laman Trip
    For helping us doing our Flow Cytometry experiments.

    Ana Restrepo
    For helping us with our in vitro replication experiments.

  • Dry Lab Support﹀

    Anne Doerr
    For giving us tips and feedback on our initial model.

  • Human Practices Support﹀

    Korienke Smit (RIVM)
    For giving us inside and feedback on our safe-by-design infographic.

    Everyone who filled in our survey
    Thereby gave us a good view on the impact of our project.

    Ines Kaal
    For being our contact person for our blog on biotechnologie.com.

    International Student Chaplaincy
    For collaboration on hosting the Global Meeting Point.

    Marijn van der Brink
    For being our co-presentator at the Boerhaave museum.

  • Integrated Human Practices﹀

    Marjolein Engels
    For giving us valuable feedback on the nature of microplastics and the currently existing methods to retrieve them from the environment.

    Prof. Neelke Doorn
    For giving us insights in the ethical issues around the valorisation of wastewater.

    Paul Roeleveld
    For sharing his knowledge about how microplastics are filtered out of the water.

  • Scientific Support﹀

    Cécile van der Vlugt-Bergmans (RIVM)
    For giving us insights about the potential environmental impact of our project (self-replicating plasmids).

    Dr. Jean-Marc Daran
    For telling us about the need for a tool to characterize genes and pointing out the challenges we may face with our design.

    Prof. Pascale Daran-Lapujade
    For informing us about copy number control.

    Prof. Mark van Loosdrecht
    For telling us about microbes worthy of research and the possible environmental impact of our project.

    Dr. Bertus Beaumont
    For providing us with new insights about directed evolution.

    Prof. Jack Pronk
    For informing us that different bacterial species have a different codon usage and how important it is to have control over expression.

    Dr. Aljoscha Wahl
    For giving insight into the modeling and for providing us with names of possible stakeholders.

    Dr. Duncan McMillan
    For telling us about broad-host-range plasmids and inspiring us to collaborate with labs to prove our system.

    Dr. Megan Palmer
    For pointing out possible problems with surveys and suggesting more effective ways of contacting people.

    Prof. Chang Liu
    For telling us about the problems with phi29 and giving us possible alternative directions.

    Dr. Sara Mitri
    For discussing with us how our product can help her research.

    Prof. Richard van Kranenburg
    For telling us about the challenges in the bioprocess industry, pointing out the problems we may encounter, and suggesting to check the Standard European Vector Architecture (SEVA) platform.

    Dr. Terry Hazen
    For telling us about interesting enzymes to put on our plasmid and suggesting possible applications of our project.

    Dr. Julian Willis
    For giving us his expert opinion on the replication machinery of the Φ29 bacteriophage.

    Prof. Roel Bovenberg, Prof. Henk Noorman, Dr. Marcus Remmers, Dr. Hans Roubos and Wim Klop
    For giving us a chance to present our project to DSM at TU Delft and giving feedback on applications and safety.

    Prof. Daniel Gibson and SGI-DNA
    For providing us with the Vibrio natriegens (Vmax) strain and plasmid.

    Dr. Cristóbal Almendros Romero
    For providing us with P. putida.

  • Fundraising Help and Advice﹀

    Dr. Stefania Usai
    For helping us make our story clearer for the general public and advising us on how to approach companies.

  • Other﹀

    Sunnie van de Werken
    For taking pictures of us.

    Charlotte Koster
    For taking pictures during the Foldscope event.

    Dr. Michele Laureni and Ad Bergkamp
    For giving a talk about microscopes and the microbial world at the Foldscope event.

    Olga Kleijn
    For allowing us to enjoy our Foldscope event at the science centre.

    Lonneke Velds
    For promoting our Foldscope event