Difference between revisions of "Team:TUDelft/PartsTest"

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                             <table id="Table_2" class=" addborder tablesorter" style="width:100%;" cellpadding="0" cellspacing="0"><thead><tr><th>&hearts;</th><th style="width: 7em;" class="header">Name</th><th colspan="" style="padding-right:7px;" class="header">Type</th><th colspan="" style="padding-right:7px;" class="header headerSortDown">Description</th><th colspan="" style="padding-right:7px;" class="header">Designer</th><th colspan="" style="padding-right:7px;" class="header">Length</th></tr></thead><tbody>
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                             <table id="Table_2" class="pgrouptable addborder tablesorter" style="width:100%;" cellpadding="0" cellspacing="0"><thead><tr><th>&hearts;</th><th style="width: 7em;" class="header">Name</th><th colspan="" style="padding-right:7px;" class="header">Type</th><th colspan="" style="padding-right:7px;" class="header headerSortDown">Description</th><th colspan="" style="padding-right:7px;" class="header">Designer</th><th colspan="" style="padding-right:7px;" class="header">Length</th></tr></thead><tbody>
  
 
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Revision as of 11:11, 15 October 2019

Sci-Phi 29

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  • Best Basic Part
    Name Description Designer
    BBa_K2918000 blablablablablablablablablablablabla TU Delft 2019

    Hello

  • Best Composite Part
    Name Description Designer
    BBa_K2918000 blablablablablablablablablablablabla TU Delft 2019
  • Best Part Collection

    Engineering non-model organisms requires discovery of organism-specific parts or re-tuning of parts characterized in model organisms. Our part collection provides modular cloning (MoClo) compatible parts that can be used for predictable expression of genes across different bacterial species.

    To overcome the need to identify parts for different bacterial hosts, our collection provides parts of the phi29 replication machinery to establish orthogonal replication. Furthermore, the collection consists of regulatory elements (promoters, RBSs, terminators) that work in a plethora of bacterial species.

    To insulate the behavior of genetic circuits from variations associated with change in bacterial context, our collection also offers parts essential to append an incoherent feed forward loop (iFFL) to any genetic circuit. iFFL ensures that the gene of interest expression is impervious to changes in copy number, transcriptional and translational rates.

    Our collection acts as a platform to future iGEM teams for effortless engineering of their bacteria of choice.


    Basic Parts

    NameTypeDescriptionDesignerLength
    BBa_K2918005Regulatory0.1 T7 promoter TUDelft201923
    BBa_K2918006Regulatory0.5 T7 promoterTUDelft201923
    BBa_K2918007RegulatoryWild type T7 promoter TUDelft201923
    BBa_K2918009Regulatory0.5 T7 promoter variant with TALEsp1 binding siteTUDelft 201941
    BBa_K2918035RBSBBa_B0032 RBS and RiboJTUDelft 201994
    BBa_K2918013RBSBBa_B0032 RBS and SarJTUDelft 201998
    BBa_K2918034RegulatoryBroad host range promoterTUDelft 201956
    BBa_K2918011RegulatoryBroad host range promoter with TALEsp1 binding siteTUDelft 201956
    BBa_K2918037CodingCross-species harmonized GFPTUDelft 2019678
    BBa_K2918061OtherRBS (B0032) adapted for modular cloning with RibozymesTUDelft 201925
    BBa_K2918038RBSRiboJ and universal binding siteTUDelft 201985
    BBa_K2918012OtherRibozyme J (Ribo J)TUDelft 201975
    BBa_K2918036RBSSarJ and universal ribosome binding site TUDelft 201989
    BBa_K2918010RegulatoryT7 promoter with TALEsp1 binding siteTUDelft 201941
    BBa_K2918016TerminatorT7 terminator variantTUDelft 201948
    BBa_K2918008CodingTranscription Activator like Effector protein (TALEsp1)TUDelft20192640
    BBa_K2918014RBSUniversal RBSTUDelft201910
    BBa_K2918062RBSUniversal RBS site adapted for modular cloning with ribozymesTUDelft 201916
    BBa_K2918015TerminatorWild type T7 terminatorTUDelft201948
    BBa_K2918000CodingΦ29 DNA polymerase (DNAP/p2)TUDelft20191719
    BBa_K2918003CodingΦ29 Double Strand Binding Protein (DSB/p6)TUDelft2019315
    BBa_K2918002CodingΦ29 Single Stranded Binding Protein (SSB/p5)TUDelft2019375
    BBa_K2918001CodingΦ29 Terminal Protein (TP/p3)TUDelft2019801

    Composite Parts

    NameTypeDescriptionDesignerLength
    BBa_K2918017Composite0.1 T7 promoter - Universal RBS - Φ29 9 TP - WT T7 terminatorTUDelft2019890
    BBa_K2918018Composite0.5 T7 promoter - Universal RBS - Φ29 TP - T7 terminatorTUDelft2019904
    BBa_K2918019CompositeWT T7 promoter - Universal RBS - Φ29 TP - T7 terminatorTUDelft2019904
    BBa_K2918020Composite0.1 T7 promoter - Universal RBS - Φ29 DNAP - T7 terminatorTUDelft20191822
    BBa_K2918021Composite0.5 T7 promoter - Universal RBS - Φ29 DNAP - T7 terminatorTUDelft20191822
    BBa_K2918022CompositeWT T7 promoter - Universal RBS - Φ29 DNAP - WT T7 terminatorTUDelft20191899
    BBa_K2918023Composite0.1 T7 promoter - Universal RBS - Φ29 DSB (p6) - WT T7 terminatorTUDelft2019519
    BBa_K2918024Composite0.5 T7 promoter - Universal RBS - Φ29 DSB (p6) - WT T7 terminatorTUDelft2019519
    BBa_K2918025CompositeWT T7 promoter - Universal RBS - Φ29 DSB (p6) - WT T7 terminatorTUDelft2019519
    BBa_K2918026Composite0.1 T7 promoter - Universal RBS - Φ29 SSB (p5) - WT T7 terminatorTUDelft2019579
    BBa_K2918027Composite0.5 T7 promoter - Universal RBS - Φ29 SSB (p5) - WT T7 terminatorTUDelft2019579
    BBa_K2918028CompositeWT T7 promoter - Universal RBS - Φ29 SSB (p5) - WT T7 terminatorTUDelft2019579
    BBa_K2918030CompositeWT T7 promoter - Universal RBS - GFP - T7 terminatorTUDelft2019811
    BBa_K2918031Composite0.1 T7 promoter - Universal RBS - GFP - T7 terminatorTUDelft2019811
    BBa_K2918032Composite0.5 T7 promoter - Universal RBS - GFP - T7 terminatorTUDelft2019811