Difference between revisions of "Team:TUDelft/PartsTest"

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  <h1 style="border-bottom:none!important;"><b>Basic Parts</b></h1>
 
  <h1 style="border-bottom:none!important;"><b>Basic Parts</b></h1>
 
                              
 
                              
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                            <table id="Table_2" class="pgrouptable addborder tablesorter" style="width: 100%;" cellpadding="0" cellspacing="0"><thead><tr><th style="width: 7em;" class="header">Name</th><th colspan="" style="padding-right:7px;" class="header">Type</th><th colspan="" style="padding-right:7px;" class="header headerSortDown">Description</th><th colspan="" style="padding-right:7px;" class="header">Designer</th><th colspan="" style="padding-right:7px;" class="header">Length</th></tr></thead><tbody>
 
  
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<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53809"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918005">BBa_K2918005</a></td><td>Regulatory</td><td>0.1 T7 promoter </td><td width="100px">TUDelft2019</td><td align="right">23</td>
 
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<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53931"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918006">BBa_K2918006</a></td><td>Regulatory</td><td>0.5 T7 promoter</td><td width="100px">TUDelft2019</td><td align="right">23</td>
 
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<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53816"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918007">BBa_K2918007</a></td><td>Regulatory</td><td>Wild type T7 promoter </td><td width="100px">TUDelft2019</td><td align="right">23</td></td>
 
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<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53816"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918009">BBa_K2918009</a></td><td>Regulatory</td><td>0.5 T7 promoter  variant with TALEsp1 binding site</td><td width="100px">TUDelft 2019</td><td align="right">41</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54192"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918035">BBa_K2918035</a></td><td>RBS</td><td>BBa_B0032 RBS and RiboJ</td><td width="100px">TUDelft 2019</td><td align="right">94</td>
 
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<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54374"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918013">BBa_K2918013</a></td><td>RBS</td><td>BBa_B0032 RBS and SarJ</td><td width="100px">TUDelft 2019</td><td align="right">98</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53815"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918034">BBa_K2918034</a></td><td>Regulatory</td><td>Broad host range promoter</td><td width="100px">TUDelft 2019</td><td align="right">56</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54383"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918011">BBa_K2918011</a></td><td>Regulatory</td><td>Broad host range promoter with TALEsp1 binding site</td><td width="100px">TUDelft 2019</td><td align="right">56</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="55140"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918037">BBa_K2918037</a></td><td>Coding</td><td>Cross-species harmonized GFP</td><td width="100px">TUDelft 2019</td><td align="right">678</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54375"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918061">BBa_K2918061</a></td><td>Other</td><td>RBS (B0032) adapted for modular cloning with Ribozymes</td><td width="100px">TUDelft 2019</td><td align="right">25</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="55155"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918038">BBa_K2918038</a></td><td>RBS</td><td>RiboJ and universal binding site</td><td width="100px">TUDelft 2019</td><td align="right">85</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="55150"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918012">BBa_K2918012</a></td><td>Other</td><td>Ribozyme J (Ribo J)</td><td width="100px">TUDelft 2019</td><td align="right">75</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54379"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918036">BBa_K2918036</a></td><td>RBS</td><td>SarJ and universal ribosome binding site </td><td width="100px">TUDelft 2019</td><td align="right">89</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54352"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918010">BBa_K2918010</a></td><td>Regulatory</td><td>T7 promoter with TALEsp1 binding site</td><td width="100px">TUDelft 2019</td><td align="right">41</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54349"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918016">BBa_K2918016</a></td><td>Terminator</td><td>T7 terminator variant</td><td width="100px">TUDelft 2019</td><td align="right">48</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54076"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918008">BBa_K2918008</a></td><td>Coding</td><td>Transcription Activator like Effector protein (TALEsp1)</td><td width="100px">TUDelft2019</td><td align="right">2640</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54344"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918014">BBa_K2918014</a></td><td>RBS</td><td>Universal RBS</td><td width="100px">TUDelft2019</td><td align="right">10</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53929"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918062">BBa_K2918062</a></td><td>RBS</td><td>Universal RBS site adapted for modular cloning with ribozymes</td><td width="100px">TUDelft 2019</td><td align="right">16</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54257"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918015">BBa_K2918015</a></td><td>Terminator</td><td>Wild type T7 terminator</td><td width="100px">TUDelft2019</td><td align="right">48</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="54193"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918000">BBa_K2918000</a></td><td>Coding</td><td>Φ29 DNA polymerase (DNAP/p2)</td><td width="100px">TUDelft2019</td><td align="right">1719</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53810"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918003">BBa_K2918003</a></td><td>Coding</td><td>Φ29 Double Strand Binding Protein (DSB/p6)</td><td width="100px">TUDelft2019</td><td align="right">315</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53814"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918002">BBa_K2918002</a></td><td>Coding</td><td>Φ29 Single Stranded Binding Protein (SSB/p5)</td><td width="100px">TUDelft2019</td><td align="right">375</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53812"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr><tr><td><a class="noul_link part_link" href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K2918001">BBa_K2918001</a></td><td>Coding</td><td>Φ29 Terminal Protein (TP/p3)</td><td width="100px">TUDelft2019</td><td align="right">801</td>
 
−
 
−
<form method="post" action="/cgi/partsdb/pgroup.cgi?pgroup=iGEM2019&amp;group=TUDelft" enctype="multipart/form-data"></form><input type="hidden" name="Editing" value="Editing"><input type="hidden" name="part" value="53857"><input type="hidden" name="pgroup" value="iGEM2019"><input type="hidden" name="group" value="TUDelft"></tr></tbody></table> 
 
  
  

Revision as of 09:31, 15 October 2019

Sci-Phi 29

...



  • Best Basic Part﹀
    ♥ Name Description Designer
    ♥ BBa_K2918000 blablablablablablablablablablablabla TU Delft 2019

    Hello

  • Best Composite Part﹀
    ♥ Name Description Designer
    ♥ BBa_K2918000 blablablablablablablablablablablabla TU Delft 2019
  • Best Part Collection﹀

    • Engineering non-model organisms requires discovery of organism-specific parts or re-tuning of parts characterized in model organisms. Our part collection provides modular cloning (MoClo) compatible parts that can be used for predictable expression of genes across different bacterial species.

      To overcome the need to identify parts for different bacterial hosts, our collection provides parts of the phi29 replication machinery to establish orthogonal replication. Furthermore, the collection consists of regulatory elements (promoters, RBSs, terminators) that work in a plethora of bacterial species.

      To insulate the behavior of genetic circuits from variations associated with change in bacterial context, our collection also offers parts essential to append an incoherent feed forward loop (iFFL) to any genetic circuit. iFFL ensures that the gene of interest expression is impervious to changes in copy number, transcriptional and translational rates.

      Our collection acts as a platform to future iGEM teams for effortless engineering of their bacteria of choice.


      Basic Parts


      Composite Parts

      NameTypeDescriptionDesignerLength
      BBa_K2918017Composite0.1 T7 promoter - Universal RBS - Φ29 9 TP - WT T7 terminatorTUDelft2019890
      BBa_K2918018Composite0.5 T7 promoter - Universal RBS - Φ29 TP - T7 terminatorTUDelft2019904
      BBa_K2918019CompositeWT T7 promoter - Universal RBS - Φ29 TP - T7 terminatorTUDelft2019904
      BBa_K2918020Composite0.1 T7 promoter - Universal RBS - Φ29 DNAP - T7 terminatorTUDelft20191822
      BBa_K2918021Composite0.5 T7 promoter - Universal RBS - Φ29 DNAP - T7 terminatorTUDelft20191822
      BBa_K2918022CompositeWT T7 promoter - Universal RBS - Φ29 DNAP - WT T7 terminatorTUDelft20191899
      BBa_K2918023Composite0.1 T7 promoter - Universal RBS - Φ29 DSB (p6) - WT T7 terminatorTUDelft2019519
      BBa_K2918024Composite0.5 T7 promoter - Universal RBS - Φ29 DSB (p6) - WT T7 terminatorTUDelft2019519
      BBa_K2918025CompositeWT T7 promoter - Universal RBS - Φ29 DSB (p6) - WT T7 terminatorTUDelft2019519
      BBa_K2918026Composite0.1 T7 promoter - Universal RBS - Φ29 SSB (p5) - WT T7 terminatorTUDelft2019579
      BBa_K2918027Composite0.5 T7 promoter - Universal RBS - Φ29 SSB (p5) - WT T7 terminatorTUDelft2019579
      BBa_K2918028CompositeWT T7 promoter - Universal RBS - Φ29 SSB (p5) - WT T7 terminatorTUDelft2019579
      BBa_K2918030CompositeWT T7 promoter - Universal RBS - GFP - T7 terminatorTUDelft2019811
      BBa_K2918031Composite0.1 T7 promoter - Universal RBS - GFP - T7 terminatorTUDelft2019811
      BBa_K2918032Composite0.5 T7 promoter - Universal RBS - GFP - T7 terminatorTUDelft2019811