Difference between revisions of "Team:Humboldt Berlin/Contribution"

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                    <h3 style="text-align:center" , class="headline3">Conclusion: Model of PET degradation by <i>Chlamydomonas reinhardtii</i></h3>
 
 
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Revision as of 22:47, 15 October 2019

Colorporteins

Characterization

It's colorfull

Characterizing Chromoproteins

We encountered problems when measuring the the YFP-signal in our transformed C. rheinhardtii YFP strains, even though we were able to detect YFP when examining the cells with the fluorescence microscope. To get a better understanding of the protocols followed to measure absorbance and fluorescence spectra with a plate reader, we conducted some exemplary measurements with fluorescent and non-fluorescent chromoproteins expressed in E. coli. We tested three different chromoproteins from the iGEM Registry of Standard Biological Parts in terms of their absorption spectra (as well as the fluorescence spectrum in case of amajLime):

Therefore we transformed the pSB1C3 vector with the respective chromoprotein constructs (which all carry a promotor and RBS sequence) into E. coli (DH10B Competent Cells). After cultivation and we lysed the harvested cells according to our lysis protocol .

Picture Chromoproteins

With a plate reader (TECAN Plate Reader Infinite 200 Pro) we measured the absorbance (and fluorescence) spectra of the cleared lysate. For the interpretation of the spectra we utilized our lysis buffer as blank measurement. We obtained characteristic absorbance spectra for all three chromoproteins, with the respective absorbance peak equivalent to the values described in the literatur (Liljeruhm et al. 2018). For the fluorescent chromoprotein amajLime we were able to measure a evident fluorescence spectrum with a clear peak at xxx nm.

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Pverview of the hierarchical and modular cloning system

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