Difference between revisions of "Team:Calgary/Software"
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| − | To help the iGEM community, iGEM | + | To help the iGEM community, and synthetic biology communit as a whole, iGEM Calgarybuilt two software tools for the iGEM competition. One to optimize BioBricks for synthesis, |
| − | and the other | + | and the other to help develop genetic algorithms. |
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<h3 style="text-align:center">BOTs</h3> | <h3 style="text-align:center">BOTs</h3> | ||
<p style="text-align:center">BioBrick Optimization Tool for synthesis</p> | <p style="text-align:center">BioBrick Optimization Tool for synthesis</p> | ||
| − | <p>A tool created to help synthetic biologists | + | <p>A tool created to help synthetic biologists synthesize BioBricks by removing repeats, optimize gc content, and optimize for expression.</p> |
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<h3 style="text-align:center">iGAM</h3> | <h3 style="text-align:center">iGAM</h3> | ||
<p style="text-align:center">international Genetic Algorithm Machine</p> | <p style="text-align:center">international Genetic Algorithm Machine</p> | ||
| − | <p>Using Genetic Algorithms to understand and modify proteins for chosen | + | <p>Using Genetic Algorithms to understand and modify proteins for chosen parameters. This software tool was critical in creating modGIX a potentially more emulsion-resistant version of 6GIX.</p> |
</div> | </div> | ||
Revision as of 02:08, 22 October 2019
Software Tools
To help the iGEM community, and synthetic biology communit as a whole, iGEM Calgarybuilt two software tools for the iGEM competition. One to optimize BioBricks for synthesis, and the other to help develop genetic algorithms.
BOTs was shown to be compatible with synthesis checking software such as IT Gene Fragment Synthesis, can be easily used with its website to optimize BioBricks.
iGAM is built within an R package, iGAM is flexible enough to allow teams to build their own genetic algorithms, iGAM is a toolbox.
