Difference between revisions of "Team:Vilnius-Lithuania/Safety"

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         <a href="#">Project</a>
 
         <a href="#">Project</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Description" class="sub">Inspiration & Description</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Description" class="sub">Inspiration & Description</a>
            <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Design" class="sub">Design & Results</a>
 
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation" class="sub">Transcriptional regulation</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation" class="sub">Transcriptional regulation</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Plasmid_Copy_Number_Control" class="sub">Plasmid copy number control</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Plasmid_Copy_Number_Control" class="sub">Plasmid copy number control</a>
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control" class="sub">Degradation rate control</a>
+
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control" class="sub">Post-translational regulation</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Demonstrate" class="sub">Demonstration</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Demonstrate" class="sub">Demonstration</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Parts" class="sub">Parts</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Parts" class="sub">Parts</a>
 
         <a href="#">Modeling</a>
 
         <a href="#">Modeling</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Model" class="sub">Overview</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Model" class="sub">Overview</a>
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control_Model" class="sub">Degradation rate control</a>
+
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control_Model" class="sub">Post-translational regulation</a>
            <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Plasmid_Copy_Number_Control_Model" class="sub">Plasmid copy number control</a>
+
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation_CarH" class="sub">Transcriptional regulation (CarH)</a>
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation_CarH" class="sub">Transcriptional regulation_CarH</a>
+
            <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradataion_Rate_Control_BpHP1" class="sub">Degradation rate control_BpHP1</a>
+
 
         <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Software">Software</a>
 
         <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Software">Software</a>
 
         <a href="#">Human Practices</a>
 
         <a href="#">Human Practices</a>
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Human_Practices" class="sub">Human Practices</a>
+
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Human_Practices" class="sub">Integrated Human Practices</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Public_Engagement" class="sub">Education & Public Engagment</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Public_Engagement" class="sub">Education & Public Engagment</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Collaborations" class="sub">Collaboration</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Collaborations" class="sub">Collaboration</a>
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                 <li class="menu-item" style="position: relative;left:200px;opacity:0">
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Design">Design & Results</a>
+
                     <a href="#">Design & Results:</a>
 
                 </li>
 
                 </li>
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+
                 <li class="menu-item menu-item-bullet" style="position: relative;padding-left:24px;left:200px;opacity:0">
 
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation">Transcriptional regulation</a>
 
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation">Transcriptional regulation</a>
 
                 </li>
 
                 </li>
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+
                 <li class="menu-item menu-item-bullet" style="position: relative;padding-left:24px;left:200px;opacity:0">
 
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Plasmid_Copy_Number_Control">Plasmid copy number control</a>
 
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Plasmid_Copy_Number_Control">Plasmid copy number control</a>
 
                 </li>
 
                 </li>
                 <li class="menu-item" style="position: relative;left:200px;opacity:0;padding-left:24px">
+
                 <li class="menu-item menu-item-bullet" style="position: relative;padding-left:24px;left:200px;opacity:0">
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control">Degradation rate control</a>
+
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control">Post-translational regulation</a>
 
                 </li>
 
                 </li>
 
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                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Parts">Parts</a>
 
                     <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Parts">Parts</a>
 +
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                <li class="menu-item" style="position: relative;left:200px;opacity:0">
 +
                    <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Measurement">Measurement</a>
 
                 </li>
 
                 </li>
 
             </ul>
 
             </ul>
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                     </li>
 
                     </li>
 
                     <li class="menu-item" style="position: relative;left:200px;opacity:0">
 
                     <li class="menu-item" style="position: relative;left:200px;opacity:0">
                       <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control_Model">Degradation rate control</a>
+
                       <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradation_Rate_Control_Model">Post-translational regulation</a>
 
                     </li>
 
                     </li>
 
                     <li class="menu-item" style="position: relative;left:200px;opacity:0">
 
                     <li class="menu-item" style="position: relative;left:200px;opacity:0">
                      <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Plasmid_Copy_Number_Control_Model">Plasmid copy number control</a>
+
                       <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation_CarH">Transcriptional regulation (CarH)</a>
                    </li>
+
                    <li class="menu-item" style="position: relative;left:200px;opacity:0">
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                       <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Transcriptional_Regulation_CarH">Transcriptional regulation_CarH</a>
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                    </li>
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                    <li class="menu-item" style="position: relative;left:200px;opacity:0">
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                      <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Degradataion_Rate_Control_BpHP1">Degradation rate control_BpHP1 </a>
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                     </li>
 
                     </li>
  
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                         <a href="#" class="return" onclick="returnMenu('hp')">Back to Main Menu</a>
 
                         <a href="#" class="return" onclick="returnMenu('hp')">Back to Main Menu</a>
 
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                         <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Human_Practices">Human Practices</a>
+
                         <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Human_Practices">Integrated Human Practices</a>
 
                     </li>
 
                     </li>
 
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                                 <a href="https://2019.igem.org/Team:Vilnius-Lithuania/Safety">Safety</a>
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                                 <a class="active" href="https://2019.igem.org/Team:Vilnius-Lithuania/Safety">Safety</a>
 
                             </li>
 
                             </li>
 
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             <a href="https://2019.igem.org/Team:Vilnius-Lithuania">Home</a>
 
             <a href="https://2019.igem.org/Team:Vilnius-Lithuania">Home</a>
 
         </li>
 
         </li>
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                 <div class="content-block">
 
                 <div class="content-block">
 
                     <!--TEKSTAS-->
 
                     <!--TEKSTAS-->
                     <h4 class="page-heading">First heading</h4>
+
                     <h4 class="page-heading">GENERAL LABORATORY SAFETY</h4>
                     <p>Lorem ipsum dolor sit amet, consectetur adipiscing elit. Curabitur congue magna magna, ac gravida
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                     <p>Safety is a crucial factor in scientific research. To minimize the possible risk of laboratory-related
                        urna lacinia in. Duis eleifend suscipit nisi non maximus. Orci varius natoque penatibus et magnis
+
                    danger, we took the requirements of lab work and project safety very seriously. Before starting lab
                        dis parturient montes, nascetur ridiculus mus. Integer sed arcu tortor. Sed ut mi ac quam luctus
+
                    work, we studied safety protocols and analyzed the safety level of the laboratory and classified it as
                        iaculis id vitae magna. Praesent ultricies lacus id pharetra viverra. Nulla lobortis bibendum augue,
+
                    Biosafety level 1. Then we read and learned to apply and utilize the safety protocols, which ought to
                        et congue ante elementum at. Mauris ante odio, porttitor vel varius malesuada, porta ac neque.</p>
+
                    be carried out at this level of Biosafety:</p>
               
+
                                   
               
+
                    <ul>
 +
                      <li>decontamination of materials before disposal, using an autoclave;</li>
 +
                      <li>personal protective equipment (lab coats, eye protection, and gloves);</li>
 +
                      <li>mechanical pipetting only;</li>
 +
                      <li>the prohibition of food, drinks, and any smokable materials, etc.</li>
 +
                    </ul>  <br>
 +
                   
 +
                    <p>Furthermore, laboratory team members had previously worked in laboratories of the same biosafety
 +
                    level; hence, they were highly-experienced and familiar with the work requirements.</p>
 +
 
 +
                    <h4 class="page-heading">SAFE PROJECT DESIGN</h4>
 +
                    <p>Since our laboratory was classified as Biosafety level 1, all experiments during the development of
 +
                    the “Colight” were carried out using only well-characterized and non-pathogenic <i>Escherichia coli</i>
 +
                    strains (<i>E. coli</i> DH5α, TG1, BL21 (DE3), Arctic Express (DE3) and Nissle 1917).</p>
 +
 
 +
                    <h4 class="page-heading">SAFE LABORATORY WORK</h4>
 +
                    <ul>
 +
                      <li>Laboratory team members were provided with personal protective equipment: <b>lab coats,
 +
eyewear, and enclosed footwear</b> were used to minimize the possibility of skin contact area
 +
with harmful substances. Before leaving the lab, the team made sure to disinfect and sterilize
 +
their clothing to prevent the contamination of the external environment</li>
 +
                      <li>Specific safety equipment: the locations and operating procedures of <b>emergency showers
 +
and eyewashes</b>, as well as the fire extinguisher and the panic button</li>
 +
                      <li>Waste disposal: the team was introduced to <b>autoclaving protocols and specific chemical
 +
waste disposal protocols</b> according to the compounds used</li>
 +
                      <li>Chemical safety: the <b>locations and appropriate storage methods for both flammable and
 +
potentially hazardous chemicals</b>, as well as the required working environment protocols to
 +
handle these substances: working in a functioning fume hood, etc.</li>
 +
                    </ul><br>
 +
 
 +
                    <h4 class="page-heading">SPECIFIC LABORATORY SAFETY</h4>
 +
                    <p>Some experimental techniques required the use of UV light or usage of compounds, requiring
 +
additional safety protocols. All necessary precautions were taken to prevent harm.</p>
 +
                    <p><b>UV light:</b> We used the UV light both to sterilize our laminar flow hoods and equipment, as well as for DNA purification from agarose gels. Our team members wore protective glasses, which fell
 +
under the personal protective equipment criteria. Due to very few personal close-up encounters with
 +
UV and taken safety precautions, we completely minimized the possible hazards of encountering UV light in the lab. Also, to minimize the contact time with the UV light, we introduced blue light transilluminators to common laboratory procedures.</p>
 +
                    <p><b>Ethidium Bromide:</b> This compound is a potent mutagen and is moderately toxic after acute
 +
exposure. Therefore, the lab team took it upon themselves to familiarize themselves with the appropriate procedures that are required to handle cases of spills or acute exposures. These procedures included working in a functioning fume hood and wearing personal protective equipment (PPE) to minimize the chance of exposure, as well as extensively studying the material safety data sheet (MSDS) for Ethidium Bromide. We disposed of the product in accord with the disposal protocols and the state safety regulations.</p>
 +
                    <p><b>Antibiotics:</b> We used a few main antibiotics for the selection procedure. According to the material safety data sheet (MSDS) for ampicillin, chloramphenicol, and kanamycin, these compounds are known to have hazardous effects at high concentrations and both acute and chronic exposure to humans via inhalation, ingestion, or contact with eyes. Therefore, the team wore personal protective equipment (PPE) when handling the compound, studied the safety protocols, and were equipped with the necessary information to handle spills, acute exposures, and disposed of the product in accord with the disposal protocols as well as the state safety regulations.</p>
 
                 </div>
 
                 </div>
 
             </div>
 
             </div>

Latest revision as of 15:49, 21 October 2019

Safety

GENERAL LABORATORY SAFETY

Safety is a crucial factor in scientific research. To minimize the possible risk of laboratory-related danger, we took the requirements of lab work and project safety very seriously. Before starting lab work, we studied safety protocols and analyzed the safety level of the laboratory and classified it as Biosafety level 1. Then we read and learned to apply and utilize the safety protocols, which ought to be carried out at this level of Biosafety:

  • decontamination of materials before disposal, using an autoclave;
  • personal protective equipment (lab coats, eye protection, and gloves);
  • mechanical pipetting only;
  • the prohibition of food, drinks, and any smokable materials, etc.

Furthermore, laboratory team members had previously worked in laboratories of the same biosafety level; hence, they were highly-experienced and familiar with the work requirements.

SAFE PROJECT DESIGN

Since our laboratory was classified as Biosafety level 1, all experiments during the development of the “Colight” were carried out using only well-characterized and non-pathogenic Escherichia coli strains (E. coli DH5α, TG1, BL21 (DE3), Arctic Express (DE3) and Nissle 1917).

SAFE LABORATORY WORK

  • Laboratory team members were provided with personal protective equipment: lab coats, eyewear, and enclosed footwear were used to minimize the possibility of skin contact area with harmful substances. Before leaving the lab, the team made sure to disinfect and sterilize their clothing to prevent the contamination of the external environment
  • Specific safety equipment: the locations and operating procedures of emergency showers and eyewashes, as well as the fire extinguisher and the panic button
  • Waste disposal: the team was introduced to autoclaving protocols and specific chemical waste disposal protocols according to the compounds used
  • Chemical safety: the locations and appropriate storage methods for both flammable and potentially hazardous chemicals, as well as the required working environment protocols to handle these substances: working in a functioning fume hood, etc.

SPECIFIC LABORATORY SAFETY

Some experimental techniques required the use of UV light or usage of compounds, requiring additional safety protocols. All necessary precautions were taken to prevent harm.

UV light: We used the UV light both to sterilize our laminar flow hoods and equipment, as well as for DNA purification from agarose gels. Our team members wore protective glasses, which fell under the personal protective equipment criteria. Due to very few personal close-up encounters with UV and taken safety precautions, we completely minimized the possible hazards of encountering UV light in the lab. Also, to minimize the contact time with the UV light, we introduced blue light transilluminators to common laboratory procedures.

Ethidium Bromide: This compound is a potent mutagen and is moderately toxic after acute exposure. Therefore, the lab team took it upon themselves to familiarize themselves with the appropriate procedures that are required to handle cases of spills or acute exposures. These procedures included working in a functioning fume hood and wearing personal protective equipment (PPE) to minimize the chance of exposure, as well as extensively studying the material safety data sheet (MSDS) for Ethidium Bromide. We disposed of the product in accord with the disposal protocols and the state safety regulations.

Antibiotics: We used a few main antibiotics for the selection procedure. According to the material safety data sheet (MSDS) for ampicillin, chloramphenicol, and kanamycin, these compounds are known to have hazardous effects at high concentrations and both acute and chronic exposure to humans via inhalation, ingestion, or contact with eyes. Therefore, the team wore personal protective equipment (PPE) when handling the compound, studied the safety protocols, and were equipped with the necessary information to handle spills, acute exposures, and disposed of the product in accord with the disposal protocols as well as the state safety regulations.