Difference between revisions of "Team:NYU Abu Dhabi/"

 
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Line 4: Line 4:
 
<style>
 
<style>
 
#home_logo, #sideMenu { display:none; }
 
#home_logo, #sideMenu { display:none; }
−
#sideMenu, #top_title, .patrollink  {display:none;}
+
#sideMenu, #top_title, .patrollink  {display:none; }
 
#content { margin-left:0px; margin-top:-30px; padding:0px; width:100%;}
 
#content { margin-left:0px; margin-top:-30px; padding:0px; width:100%;}
 
</style>
 
</style>
−
 
  
 
<head>
 
<head>
 
     <meta charset="utf-8">
 
     <meta charset="utf-8">
 
     <meta name="viewport" content="width=device-width, initial-scale=1.0, shrink-to-fit=no">
 
     <meta name="viewport" content="width=device-width, initial-scale=1.0, shrink-to-fit=no">
−
     <title>Bio Results</title>
+
     <title>Volatect</title>
−
     <link rel="stylesheet" href="assets/bootstrap/css/bootstrap.min.css">
+
     <!-- <link rel="stylesheet" href="assets/bootstrap/css/bootstrap.min.css"> -->
 +
    <link rel="icon" href="demo_icon.gif" type="image/gif" sizes="16x16">
 
     <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato">
 
     <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato">
 
     <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Catamaran:100,200,300,400,500,600,700,800,900">
 
     <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Catamaran:100,200,300,400,500,600,700,800,900">
Line 21: Line 21:
 
     <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/animate.css/3.5.2/animate.min.css">
 
     <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/animate.css/3.5.2/animate.min.css">
 
     <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/aos/2.1.1/aos.css">
 
     <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/aos/2.1.1/aos.css">
−
<style>
+
    <!-- <link rel="stylesheet" href="assets/css/styles.min.css"> -->
−
.text-content {
+
     <link rel="prefetch" href="https://2019.igem.org/wiki/images/thumb/0/0a/T--NYU_Abu_Dhabi--prender1.png/1600px-T--NYU_Abu_Dhabi--prender1.png">
−
  font-size: 22px;
+
     <script>
−
     font-size: -15.625rem;
+
      let getName = () => {
−
     line-height: 2.5;
+
      const name = document.getElementById('user_item').innerText;
−
}
+
      return name.charAt(0).toUpperCase() + name.slice(1);
−
.nav-item {
+
      }
−
  color:black;
+
      let setIt = () => {
−
}
+
        if(((getName()!="Login")||(getName()==""))){
−
#exTab1 .tab-content {
+
          if((getName().length<= 15)) {
−
  color : white;
+
      document.getElementById('nameHolder').innerHTML = "Hey " + getName() + "!";
−
  background-color: #428bca;
+
      clearInterval(intervalAdder);
−
  padding : 5px 15px;
+
    }
−
}
+
    }
 +
      }
 +
      intervalAdder = setInterval(setIt, 300);
 +
      $(window).load(function(){
 +
    $('.loader').fadeOut();
 +
      });
 +
    </script>
 +
</head>
  
−
#exTab2 h3 {
+
<body id="page-top">
−
   color : white;
+
    <!-- Start: *DEPENDANCIES AND PRELOADING -->
−
  background-color: #428bca;
+
    <script
−
  padding : 5px 15px;
+
   src="https://2019.igem.org/Team:NYU_Abu_Dhabi/jquery?action=raw&ctype=text/javascript"></script>
−
}
+
  <script>
 +
        $(document).ready(function() {
 +
/*
 +
            $.when($.get("https://2019.igem.org/Team:NYU_Abu_Dhabi/bootstrapcss?action=raw&ctype=text/css"))
 +
            .done(function(response) {
 +
                $('<style />').text(response).appendTo($('head'));
 +
            });
 +
            $.when($.get("https://2019.igem.org/Team:NYU_Abu_Dhabi/sampleStyles?action=raw&ctype=text/css"))
 +
            .done(function(response) {
 +
                $('<style />').text(response).appendTo($('head'));
 +
            });*/
 +
        $('<style />').text("h1 { font-family: Catamaran !important; font-weight: 200 !important;}").appendTo($('head'));
 +
        })
 +
        </script>
  
−
/* remove border radius for the tab */
+
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/TweenMax?action=raw&ctype=text/javascript"></script>
 +
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/ScrollMagic?action=raw&ctype=text/javascript"></script>
 +
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/AnimationGsap?action=raw&ctype=text/javascript"></script>
 +
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/smoothScroll?action=raw&ctype=text/javascript"></script>
 +
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/jquery?action=raw&ctype=text/javascript"></script>
  
−
#exTab1 .nav-pills > li > a {
+
    <script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/bootstrapjs?action=raw&ctype=text/javascript"></script>
−
  border-radius: 0;
+
    <!--<script src="https://cdnjs.cloudflare.com/ajax/libs/popper.js/1.11.0/umd/popper.min.js"></script>-->
−
}
+
    <script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/sampleScript?action=raw&ctype=text/javascript"></script>
  
−
/* change border radius for the tab , apply corners on top*/
+
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/IndicatorDebug?action=raw&ctype=text/javascript"></script>
  
−
#exTab3 .nav-pills > li > a {
 
−
  border-radius: 4px 4px 0 0 ;
 
−
}
 
−
 
−
#exTab3 .tab-content {
 
−
  color : white;
 
−
  background-color: #428bca;
 
−
  padding : 5px 15px;
 
−
}
 
−
</style>
 
−
 
−
</head>
 
  
−
<body style="position:relative;">
+
    <!-- End: *DEPENDANCIES AND PRELOADING -->
−
     <nav class="navbar navbar-light navbar-expand-lg fixed-top otherPages" style="top:10px;" id="mainNav">
+
     <nav class="navbar navbar-light navbar-expand-lg fixed-top" style="padding:20px 0px;" id="mainNav">
−
         <div class="container"><img src="https://2019.igem.org/wiki/images/7/7c/T--NYU_Abu_Dhabi--logoBlack.png" class = "img-fluid" style="width:21px;padding-right:5px;" ><a class="navbar-brand js-scroll-trigger" href="https://2019.igem.org/Team:NYU_Abu_Dhabi">Volatect</a><button data-toggle="collapse" data-target="#navbarResponsive" class="navbar-toggler float-right" aria-controls="navbarResponsive"
+
        <!-- Start: IGEM MENU LINKS -->
 +
        <!-- End: IGEM MENU LINKS -->
 +
         <div class="container"><img src="https://2019.igem.org/wiki/images/f/f3/T--NYU_Abu_Dhabi--logoWhite.png" class="img-fluid" style="max-width: 30px;
 +
  width:100%;padding: 5px;"><a class="navbar-brand js-scroll-trigger" href="https://2019.igem.org/Team:NYU_Abu_Dhabi">Volatect</a><button data-toggle="collapse" data-target="#navbarResponsive" class="navbar-toggler float-right" aria-controls="navbarResponsive"
 
                 aria-expanded="false" aria-label="Toggle navigation"><i class="fa fa-bars"></i></button>
 
                 aria-expanded="false" aria-label="Toggle navigation"><i class="fa fa-bars"></i></button>
 
             <div class="collapse navbar-collapse" id="navbarResponsive" style="z-index: 9999;">
 
             <div class="collapse navbar-collapse" id="navbarResponsive" style="z-index: 9999;">
−
              <ul class="nav navbar-nav ml-auto">
+
                <ul class="nav navbar-nav ml-auto">
−
                <style>
+
                  <style>
−
                  a:visited {
+
                    a:visited {
−
                    color:black;
+
                      color:black;
−
                  }
+
                    }
−
                </style>
+
                  </style>
  
−
                  <li class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" id="navbarDropdown" href="#" style="height: 100%;" role="button" aria-haspopup="true">Description&nbsp;</a>
+
                    <li class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" id="navbarDropdown" href="#" style="height: 100%;" role="button" aria-haspopup="true">Description&nbsp;</a>
−
                      <div class="dropdown-menu js-scroll-trigger" role="menu"
+
                        <div class="dropdown-menu js-scroll-trigger" role="menu"
−
                          aria-labelledby="navbarDropdown">
+
                            aria-labelledby="navbarDropdown">
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Description">Description</a>
+
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Description">Description</a>
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Software">Software</a><a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Hardware">Hardware</a>
+
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Software">Software</a><a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Hardware">Hardware</a>
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Parts">Parts</a>
+
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Parts">Parts</a>
 +
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Demonstrate">Demonstrate</a>
  
−
                      </div>
+
                        </div>
−
                  </li>
+
                    </li>
  
  
−
                  <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Awards">Awards</a></li>
+
                    <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Awards">Awards</a></li>
  
−
                  <li class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" href="#" style="height: 100%;" role="presentation">Process&nbsp;</a>
+
                    <li class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" href="#" style="height: 100%;" role="presentation">Process&nbsp;</a>
−
                      <div class="dropdown-menu" role="menu">
+
                        <div class="dropdown-menu" role="menu">
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Experiments">Experiments</a>
+
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Experiments">Experiments</a>
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Notebook">Notebook</a>
+
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Notebook">Notebook</a>
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Results">Results&nbsp;</a>
+
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Results">Results&nbsp;</a>
−
                        <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Design">Design</a>
+
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Design">Design</a>
−
                        <a
+
−
                                class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Improve">Improve</a>
+
−
                          <a
+
−
                                  class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Safety">Safety</a>
+
−
                              </div>
+
−
                  </li>
+
  
 +
                            <a
 +
                                    class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Safety">Safety</a>
 +
                                </div>
 +
                    </li>
  
−
                  <li class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" href="#" style="height: 100%;" role="presentation">Engagement&nbsp;</a>
 
−
                      <div class="dropdown-menu" role="menu">
 
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Collaborations">Collaborations</a>
 
−
                        <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Human_Practices">Human Practices</a>
 
−
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Human_Practices">Integrated Human</a><a class="dropdown-item" role="presentation"
 
−
                              href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Public_Engagement">Public Engagement</a>
 
−
                              <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Attributions">Attributions</a>
 
−
                          </div>
 
−
                  </li>
 
−
                  <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Team">Team</a></li>
 
  
−
                <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/About">About</a></li>
+
                    <li class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" href="#" style="height: 100%;" role="presentation">Engagement&nbsp;</a>
 +
                        <div class="dropdown-menu" role="menu">
 +
                            <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Collaborations">Collaborations</a>
 +
                          <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Human_Practices">Human Practices</a>
 +
                            <a class="dropdown-item" role="presentation"
 +
                                href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Public_Engagement">Public Engagement</a>
 +
                                <a class="dropdown-item" role="presentation" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Attributions">Attributions</a>
 +
                            </div>
 +
                    </li>
 +
                    <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Team">Team</a></li>
  
−
                  <li style="display:none" class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Parts">Parts</a></li>
+
                  <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/About">About</a></li>
−
                  <li style="display:none" class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" href="human-practices.html">HUMAN</a>
+
−
                      <div class="dropdown-menu" role="menu"><a class="dropdown-item" role="presentation" href="human-practices.html">Human Practices</a>
+
−
                          <a class="dropdown-item" role="presentation" href="integrated-humans.html">Integrated Human</a><a class="dropdown-item" role="presentation"
+
−
                              href="public-engagement.html">Public Engagement</a></div>
+
−
                  </li>
+
  
−
                  <li class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Software">WEB API</a></li>
+
                    <li style="display:none" class="nav-item" role="presentation"><a class="nav-link" href="https://2019.igem.org/Team:NYU_Abu_Dhabi/Parts">Parts</a></li>
−
              </μl>
+
                    <li style="display:none" class="nav-item dropdown" role="presentation"><a class="dropdown-toggle nav-link" data-toggle="dropdown" aria-expanded="false" href="human-practices.html">HUMAN</a>
 +
                        <div class="dropdown-menu" role="menu"><a class="dropdown-item" role="presentation" href="human-practices.html">Human Practices</a>
 +
                            <a class="dropdown-item" role="presentation"
 +
                                href="public-engagement.html">Public Engagement</a></div>
 +
                    </li>
  
 +
 +
                </ul>
 
             </div>
 
             </div>
−
 
−
 
−
 
−
 
−
 
 
         </div>
 
         </div>
 
     </nav>
 
     </nav>
−
     <script
+
     <div class="scrollWheelWrapper"></div>
−
  src="https://2019.igem.org/Team:NYU_Abu_Dhabi/jquery?action=raw&ctype=text/javascript"></script>
+
    <!-- Start: 2 Rows 1+1 Columns -->
−
<script src="
+
    <div id="fullProductHeader" class="d-none d-lg-block" style="background-color: #000000;background-image: url(&quot;https://2019.igem.org/wiki/images/f/f3/T--NYU_Abu_Dhabi--bg-pattern.png&quot;);height: 200vh;">
−
https://2019.igem.org/Team:NYU_Abu_Dhabi/TweenMax?action=raw&ctype=text/javascript"></script>
+
        <div id="headerTextVolatect">
−
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/bootstrapjs?action=raw&ctype=text/javascript"></script>
+
            <div class="row">
−
<script src="
+
                <div class="col-md-12">
−
https://2019.igem.org/Team:NYU_Abu_Dhabi/ScrollMagic?action=raw&ctype=text/javascript"></script>
+
<div id="fadeHeaderOut"></div><h1 id="meetVolatectHeader" class="text-center" style="padding-top:20%;font-size: 9vh;color: rgb(255,255,255);font-family: Catamaran !important; font-weight: 200 !important;"><span id="nameHolder"></span> Meet Volatect. Flying safe starts by flying healthy.</h1><div id="scene"></div></div>
−
 
+
            </div>
−
<script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/IndicatorDebug?action=raw&ctype=text/javascript"></script>
+
            <div class="row">
−
<style>
+
                <div class="col-md-12 d-xl-flex justify-content-xl-center"><button class="btn btn-primary text-center" type="button" style="font-size: 23px;background-color: rgb(16,35,55);visibility: hidden;">Preorder</button></div>
 +
            </div>
 +
        </div>
 +
        <div class="container">
 +
            <div class="row"><style>
 
     @media only screen and (max-width: 760px) {
 
     @media only screen and (max-width: 760px) {
 
   #mobileChecker { display: none; }
 
   #mobileChecker { display: none; }
Line 189: Line 202:
  
 
     if (is_mobile == true) {
 
     if (is_mobile == true) {
−
         /**/
+
         addClass("show")
−
        $(".dropdown-menu").each(function () {
+
−
          // $(this).addClass("show")
+
 
         });
 
         });
 
     }
 
     }
Line 197: Line 208:
 
</script>
 
</script>
 
</div>
 
</div>
−
    </nav>
+
        </div>
 +
        <!-- Start: HEADER_ANIMATIONS --><div style="position:fixed;left: 0;
 +
right: 0;" id="productImage">
  
−
    <!-- Start: Article Clean -->
+
<div class="text-center">
−
<div class="container">
+
  <img src="https://2019.igem.org/wiki/images/a/ab/T--NYU_Abu_Dhabi--loaderyo.gif" class="loader img-fluid" /><br/><img id="productImageActual" src="https://2019.igem.org/wiki/images/1/16/T--NYU_Abu_Dhabi--pn1.png" style="max-width:400px;"><div id="pinTheProduct"></div></div></div>
−
<section style="padding: 65px 0px;">
+
−
      <!--  <img style="width:100%;" src="https://2019.igem.org/wiki/images/b/b4/T--NYU_Abu_Dhabi--tm3.jpg"> -->
+
  
−
<h1 style="font-family:avenir;">Biology Results</h1>
+
<script>
−
      <nav>
+
    $(function () { // wait for document ready
−
         <div class="nav nav-tabs" id="nav-tab" role="tablist" style="color:black;">
+
        // init controller
−
          <a class="nav-item nav-link active" id="nav-achievements-tab" data-toggle="tab" href="#nav-achievements" role="tab" aria-controls="nav-achievements" aria-selected="true">Project Achievements / Setbacks</a>
+
         var controller2 = new ScrollMagic.Controller();
−
          <a class="nav-item nav-link" id="nav-results-tab" data-toggle="tab" href="#nav-results" role="tab" aria-controls="nav-results" aria-selected="false">Results</a>
+
        //TweenMax.set("#headerTextVolatect", {x:0, y:0});
−
          <a class="nav-item nav-link" id="nav-future-tab" data-toggle="tab" href="#nav-future" role="tab" aria-controls="nav-future" aria-selected="false">Future Plans</a>
+
        //TweenMax.to("#headerTextVolatect",1,{y:2, repeat:-1});
−
          <a class="nav-item nav-link" id="nav-consider-tab" data-toggle="tab" href="#nav-consider" role="tab" aria-controls="nav-consider" aria-selected="false">Considerations for Replication</a>
+
  
 +
 +
 +
        //end hover
 +
        // build tween
 +
        var tweenMoveProduct = TweenMax.to("#productImage", 1000, {top:"25%"});
 +
        var tweenFadeOut = TweenMax.to("#productImage", 1000, {opacity:0});
 +
        var tweenRotate = TweenMax.to("#productImageActual",0,{rotation:0});
 +
        var images = [
 +
        "https://2019.igem.org/wiki/images/1/16/T--NYU_Abu_Dhabi--pn1.png",
 +
        "https://2019.igem.org/wiki/images/3/35/T--NYU_Abu_Dhabi--pn2.png",
 +
        "https://2019.igem.org/wiki/images/e/ee/T--NYU_Abu_Dhabi--pn3.png",
 +
        "https://2019.igem.org/wiki/images/0/06/T--NYU_Abu_Dhabi--pn4.png",
 +
        "https://2019.igem.org/wiki/images/e/e2/T--NYU_Abu_Dhabi--pn5.png",
 +
        "https://2019.igem.org/wiki/images/e/e8/T--NYU_Abu_Dhabi--pn6.png",
 +
            "https://2019.igem.org/wiki/images/3/32/T--NYU_Abu_Dhabi--pn8.png",
 +
            "https://2019.igem.org/wiki/images/3/32/T--NYU_Abu_Dhabi--pn9.png",
 +
            "https://2019.igem.org/wiki/images/e/ea/T--NYU_Abu_Dhabi--pn10.png",
 +
            "https://2019.igem.org/wiki/images/1/13/T--NYU_Abu_Dhabi--pn11.png",
 +
            "https://2019.igem.org/wiki/images/2/2e/T--NYU_Abu_Dhabi--pn12.png",
 +
            "https://2019.igem.org/wiki/images/f/f9/T--NYU_Abu_Dhabi--pn13.png",
 +
            "https://2019.igem.org/wiki/images/2/25/T--NYU_Abu_Dhabi--pn14.png",
 +
            "https://2019.igem.org/wiki/images/9/91/T--NYU_Abu_Dhabi--pn15.png",
 +
            "https://2019.igem.org/wiki/images/6/61/T--NYU_Abu_Dhabi--pn16.png",
 +
            "https://2019.igem.org/wiki/images/a/a9/T--NYU_Abu_Dhabi--pn17.png",
 +
            "https://2019.igem.org/wiki/images/4/42/T--NYU_Abu_Dhabi--pn18.png",
 +
            "https://2019.igem.org/wiki/images/8/87/T--NYU_Abu_Dhabi--pn19.png",
 +
            "https://2019.igem.org/wiki/images/3/34/T--NYU_Abu_Dhabi--pn20.png",
 +
            "https://2019.igem.org/wiki/images/1/1f/T--NYU_Abu_Dhabi--pn21.png",
 +
            "https://2019.igem.org/wiki/images/b/bd/T--NYU_Abu_Dhabi--pn22.png",
 +
            "https://2019.igem.org/wiki/images/6/66/T--NYU_Abu_Dhabi--pn23.png",
 +
            "https://2019.igem.org/wiki/images/b/bc/T--NYU_Abu_Dhabi--pn24.png",
 +
            "https://2019.igem.org/wiki/images/0/0e/T--NYU_Abu_Dhabi--p25.png",
 +
            "https://2019.igem.org/wiki/images/4/4b/T--NYU_Abu_Dhabi--p26.png",
 +
            "https://2019.igem.org/wiki/images/2/2c/T--NYU_Abu_Dhabi--p28.png",
 +
            "https://2019.igem.org/wiki/images/8/8e/T--NYU_Abu_Dhabi--p29.png"
 +
 +
 +
 +
 +
    ];
 +
 +
    arrayLength = images.length;
 +
for (i = 0; i < arrayLength; i++) {
 +
  //  <link rel="prefetch" href="https://2019.igem.org/wiki/images/thumb/0/0a/T--NYU_Abu_Dhabi--prender1.png/1600px-T--NYU_Abu_Dhabi--prender1.png">
 +
  let code ="<link rel='prefetch' href='" + images[i] + "'>";
 +
$('head').append(code);
 +
}
 +
 +
    // TweenMax can tween any property of any object. We use this object to cycle through the array
 +
    var obj = {curImg: 0};
 +
    var tweenHeaderFade = TweenMax.to("#headerTextVolatect", 100, {opacity:0,scale:0.95});
 +
    var tweenRemoveDisplay = TweenMax.to("#productImage", 1, {display:"none"});
 +
        //productImage
 +
 +
    // create tween
 +
    var tweenBlast = TweenMax.to(obj, 1000,
 +
        {
 +
            curImg: images.length - 1,  // animate propery curImg to number of images
 +
            roundProps: "curImg",              // only integers so it can be used as an array index
 +
            repeat: 0,                                  // repeat 3 times
 +
            immediateRender: false,        // load first image automatically
 +
            ease: Linear.easeNone,          // show every image the same ammount of time
 +
            onUpdate: function () {
 +
              $("#productImageActual").attr("src", images[obj.curImg]); // set the image source
 +
            }
 +
        }
 +
    );
 +
        // build scene
 +
        var timelineProductAnimation = new TimelineMax().add(tweenHeaderFade).add(tweenRotate).add(tweenMoveProduct).add(tweenBlast,"f").add(tweenFadeOut).add(tweenRemoveDisplay);
 +
        var scene2 = new ScrollMagic.Scene({ duration:"150%",offset:"0"})
 +
        .setPin("#productImage")
 +
        .setTween(timelineProductAnimation)
 +
                        //.addIndicators({name: "pinProduct"}) // add indicators (requires plugin)
 +
                        .addTo(controller2);
 +
 +
        scene2.on("end", function (event) {
 +
    //alert("done");
 +
});
 +
        //.add(tweenTargetGroup)
 +
        var tweenTargetGroup =TweenMax.to("#myVideo", 5000, {opacity:1});
 +
        var targetGroupTimeline = new TimelineMax().add(tweenTargetGroup);
 +
        var scene2 = new ScrollMagic.Scene({ duration:"100px",offset:"0"})
 +
        .triggerElement(".videoContentText")
 +
        .setPin("#productImage")
 +
        .setTween(tweenTargetGroup)
 +
                        //.addIndicators({name: "targetVideo"}) // add indicators (requires plugin)
 +
                        .addTo(controller2);
 +
 +
    });
 +
 +
    //
 +
</script>
 +
 +
        <!-- End: HEADER_ANIMATIONS -->
 +
    </div>
 +
    <!-- End: 2 Rows 1+1 Columns -->
 +
    <!-- Start: FadeOutHeaderCode --><div id="abs200" style="position:absolute;top:200px;"></div>
 +
<script>
 +
    /*$(function () { // wait for document ready
 +
        // init controller
 +
        var controller = new ScrollMagic.Controller();
 +
 +
        // build tween
 +
        var tween = TweenMax.to("#headerTextVolatect", 1000, {opacity:0});
 +
 +
        // build scene
 +
        var scene = new ScrollMagic.Scene({offset:50, duration: 50})
 +
                        .setTween(tween)
 +
                        //.addIndicators({name: "fade the header"}) // add indicators (requires plugin)
 +
                        .addTo(controller);
 +
    });*/
 +
</script>
 +
    <!-- End: FadeOutHeaderCode -->
 +
    <div id="fadeHeaderOut"></div>
 +
    <!-- Start: TargetGroupVideo --><div class="d-none d-lg-block" style="position:relative;background-color: #000000;background-image: url('https://2019.igem.org/wiki/images/f/f3/T--NYU_Abu_Dhabi--bg-pattern.png');height: 100%;">
 +
    <style>
 +
    #myVideo {
 +
        position:relative;
 +
        z-index:0;
 +
        width: 100%;
 +
        opacity:0;
 +
}
 +
 +
.videoContent {
 +
    top:0;
 +
    bottom:0;
 +
    margin:auto;
 +
    position:absolute;
 +
    max-height:50%;
 +
    left:0;
 +
    z-index:1;
 +
  background: rgba(0, 0, 0, 0.5);
 +
  color: #f1f1f1;
 +
  width: 100%;
 +
  padding: 20px;
 +
}
 +
 +
#myBtn {
 +
  width: 200px;
 +
  font-size: 18px;
 +
  padding: 10px;
 +
  border: none;
 +
  background: #000;
 +
  color: #fff;
 +
  cursor: pointer;
 +
 +
}
 +
 +
#myBtn:hover {
 +
  background: #ddd;
 +
  color: black;
 +
}
 +
    </style>
 +
<video autoplay muted loop id="myVideo">
 +
  <!-- https://www.videvo.net/videvo_files/converted/2014_08/preview/Gatwick_Airport_1Videvo_1.mov32092.webm -->
 +
  <source src="https://2019.igem.org/wiki/images/d/d2/T--NYU_Abu_Dhabi--airport3_.mp4" type="video/mp4">
 +
</video>
 +
 +
<div class="videoContent">
 +
  <h1 class="videoContentText" style="text-align:center;font-size:7vw;height: 100%;
 +
    width:100%;
 +
    display:flex;
 +
    align-items: center;
 +
    justify-content: center;
 +
    color:white;
 +
    font-family: Catamaran !important; font-weight: 200 !important;">REVOLUTIONIZING YOUR TRAVEL EXPERIENCE</h1>
 +
 +
</div></div>
 +
    <!-- End: TargetGroupVideo -->
 +
    <!-- Start: mobileScreenProductHeader -->
 +
    <div class="d-block d-lg-none" style="width:100%;background:url('https://2019.igem.org/wiki/images/f/f3/T--NYU_Abu_Dhabi--bg-pattern.png');background-color: #000000;">
 +
        <div class="container" style="padding: 56px 0px;">
 +
            <div class="row d-md-flex justify-content-md-center align-items-md-center" style="padding: 10px;">
 +
                <div class="col"><img class="img-fluid" src="assets/img/microscope-275984_1280.jpg"></div>
 +
            </div>
 +
            <div class="row text-center d-flex justify-content-center align-items-center">
 +
                <div class="col-md-12"> <h1 style="font-size:5vw;color:#fffbfe" >Meet Volatect. A disease diagnostic device that works like magic. </h1><a class="btn btn-outline-warning btn-xl js-scroll-trigger" role="button" href="#download">pre order</a></div>
 +
            </div>
 
         </div>
 
         </div>
−
      </nav>
+
    </div>
−
      <div class="tab-content" id="nav-tabContent">
+
    <!-- End: mobileScreenProductHeader -->
−
        <br/>
+
−
        <div class="tab-pane fade show active" id="nav-achievements" role="tabpanel" aria-labelledby="nav-achievements-tab">
+
−
          <p style="font-family:avenir;font-size:18px;">
+
−
            <ul>
+
−
              <li style="font-family:avenir;font-size:18px;">Successful ligation, transformation, inoculation, and plasmid extractions of the genes for pcaA (Tuberculosis), HBcAg (Hepatitis B), IS481 (Whooping Cough), and ypo2088 (Plague)
+
−
<br /></li>
+
−
              <li style="font-family:avenir;font-size:18px;">Compared sensitivity limit of detection of RPA and PCR<br />
+
−
</li>
+
−
              <li style="font-family:avenir;font-size:18px;">Compared sensitivity limit of detection of RPA and PCR + CRISPR
+
−
<br /></li>
+
−
              <li style="font-family:avenir;font-size:18px;">Performed successful PCR and RPA on samples directly from LB broth for IS481 and HBcAg<br /></li>
+
−
            </ul>
+
  
 +
<h1 class="text-center d-block d-lg-none"> REVOLUTIONIZING YOUR TRAVEL EXPERIENCE</h1>
 +
    <video autoplay muted loop style="height:100%;width:100%;" class="d-block d-lg-none">
 +
      <source src="https://2019.igem.org/wiki/images/d/d2/T--NYU_Abu_Dhabi--airport3_.mp4" type="video/mp4">
 +
    </video>
  
−
          </p>
+
 
 +
 
 +
 
 +
    <div style="display:none;" data-aos="fade-down" data-aos-duration="500" data-aos-offset="200" class="d-block d-lg-none" style="background-color: #000000;">
 +
        <!-- Start: TargetGroupVideoMobile -->
 +
        <div class="d-block d-lg-none" style="position:relative;background-color: #000000;background-image: url('assets/img/bg-pattern.png');height: 100%;">
 +
 
 +
 
 +
</div>
 +
        <!-- End: TargetGroupVideoMobile -->
 +
    </div>
 +
 
 +
    <!-- Start: How does it work? -->
 +
    <section style="display:none;" id="volatectSteps" class="index-howto-alt py-3 " >
 +
        <div class="container d-none d-lg-block" style="padding: 100px 0px; ">
 +
            <h2 class="text-center mb-3">How does it work?</h2>
 +
            <div class="psd-line pos-rel" style="position:relative;">
 +
                <div class="row align-items-center" style="height: 800;">
 +
                    <div class="col-12 col-sm-6 d-flex flex-row justify-content-center align-items-center intro-card-1 p-5"><img class="howto-img" src="assets/img/1-02.png">
 +
                        <h2 class="grey-text d-none">Üyelik Tipini Seçerek Kayıt Olun</h2>
 +
                    </div>
 +
                    <div class="col-12 col-sm-6 d-flex flex-column justify-content-center p-5 psd-left1">
 +
                        <h3 class="d-none d-lg-block">Step 1</h3>
 +
                        <h3 class="text-center d-block d-lg-none">Step 1</h3>
 +
                        <p class="m-0 text-center text-sm-left">Lorem ipsum dolor sit amet, consectetur adipiscing elit. Cras mi nibh, tristique et sagittis in, aliquet id metus. In eleifend et dolor eget tincidunt.<br></p>
 +
                    </div>
 +
                </div>
 +
                <div class="row flex-column-reverse align-items-center flex-sm-row">
 +
                    <div class="col-12 col-sm-6 d-flex flex-column justify-content-center p-5 psd-right1">
 +
                        <h3 class="text-right d-none d-lg-block">Step 2</h3>
 +
                        <h3 class="text-center d-block d-lg-none">Step 2</h3>
 +
                        <p class="m-0 text-center text-sm-right">Etiam eget nulla ut elit placerat commodo. Etiam vestibulum consectetur quam eget pretium. Sed in suscipit augue. Nunc venenatis porttitor enim a hendrerit.&nbsp;<br></p>
 +
                    </div>
 +
                    <div class="col-12 col-sm-6 d-flex flex-row justify-content-center align-items-center intro-card-2 p-5"><img class="howto-img" src="assets/img/1-01.png">
 +
                        <h2 class="grey-text d-none">Neye İhtiyacınız Varsa Belirtin</h2>
 +
                    </div>
 +
                </div>
 +
                <div class="row align-items-center">
 +
                    <div class="col-12 col-sm-6 d-flex flex-row justify-content-center align-items-center intro-card-3 p-5"><img class="howto-img" src="assets/img/1-04.png">
 +
                        <h2 class="grey-text d-none">Size Uygun Teklifi Seçin</h2>
 +
                    </div>
 +
                    <div class="col-12 col-sm-6 d-flex flex-column justify-content-center p-5 psd-left2">
 +
                        <h3 class="d-none d-lg-block">Step 3</h3>
 +
                        <h3 class="text-center d-block d-lg-none">Step 3</h3>
 +
                        <p class="m-0 text-center text-sm-left">Integer cursus tincidunt mauris, imperdiet bibendum augue dapibus tempor. Pellentesque rhoncus neque erat. Nam at metus urna. Nullam rhoncus odio eu sem fermentum dictum.<br></p>
 +
                    </div>
 +
                </div>
 +
                <div class="row flex-column-reverse align-items-center flex-sm-row">
 +
                    <div class="col-12 col-sm-6 d-flex flex-column justify-content-center p-5 psd-right2">
 +
                        <h3 class="text-right d-none d-lg-block">Step 4</h3>
 +
                        <h3 class="text-center d-block d-lg-none">Step 4</h3>
 +
                        <p class="m-0 text-center text-sm-right">Cras iaculis, eros sit amet congue tincidunt, justo magna iaculis urna, quis aliquet tortor ipsum et purus. Vivamus gravida tristique velit. Sed non mi at massa dignissim placerat.<br></p>
 +
                    </div>
 +
                    <div class="col-12 col-sm-6 d-flex flex-row justify-content-center align-items-center intro-card-4 p-5"><img class="howto-img" src="assets/img/1-03.png">
 +
                        <h2 class="grey-text d-none">Piyasa Analizi Yaptırın</h2>
 +
                    </div>
 +
                </div>
 +
            </div>
 
         </div>
 
         </div>
 +
    </section>
 +
    <!-- End: How does it work? -->
 +
    <div></div>
 +
    <!-- Start: Features Desktop -->
 +
    <div id="engineeringbio" class="d-none d-lg-block" style="background-color: black;background-image: url(&quot;https://2019.igem.org/wiki/images/f/f3/T--NYU_Abu_Dhabi--bg-pattern.png&quot;);height: 500vh;width: 100%;"><div id="middleMarker"></div>
 +
<div class="row " style="position:fixed;top:25%;width:100%;opacity:0;" id="featuresHeaderText">
 +
  <div style="width:100%;" class="col w-100 text-center">
 +
      <h1 style="color:white;font-size: 9vh;">State of the art <span style="color:#fdcc52">Engineering</span> and <span style="color:#fdcc52;">Biology</span></h1>
 +
    </div>
 +
</div>
  
−
        <div class="tab-pane fade" id="nav-results" role="tabpanel" aria-labelledby="nav-results-tab">
+
<div class="row" style="position:fixed;top:25%;opacity:0;" id="middleFeatureContainer">
−
          <div class="row">
+
  <div id="featureHolder" class="col-sm-6 my-auto">
−
            <style>a {color:black;}</style>
+
    <div id="canvas-container">
−
  <div class="col-sm-4">
+
  <canvas id="helixCanvas" style="left:0;max-width: 100%; height: auto"></canvas>
−
    <ul class="nav flex-column" >
+
</div>
  
−
  <li class="nav-item">
 
−
    <a class="nav-link active" href="#">Preparation and Verification of pure DNA samples </a>
 
−
  </li>
 
−
  <li class="nav-item">
 
−
    <a class="nav-link" href="#sensitivity">Sensitivity Test with Polymerase Chain Reaction (PCR) and Recombinase Polymerase Amplification (RPA)</a>
 
−
  </li>
 
−
  <li class="nav-item">
 
−
    <a class="nav-link" href="#dna">DNA Amplification Verification Using SYBR Green </a>
 
−
  </li>
 
−
  <li class="nav-item">
 
−
    <a class="nav-link" href="#test">Test Using Bacteria from LB broth</a>
 
−
  </li>
 
−
  <li class="nav-item">
 
−
    <a class="nav-link" href="#detect">Detection Using CRISPR-Cas12a</a>
 
−
  </li>
 
−
<br/><br/>
 
  
 +
<script>
 +
var unit = 300;
 +
var canvas, ctx, height, width, xAxis, yAxis, draw;
  
 +
var helixColor = '#fff';
  
−
</ul>
+
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−
  </div>
+
var lineWeight = 1.4;
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  <div class="col-sm-8">
+
var lineFreq = 50;
−
    <h1 style="font-family:avenir;">Preparation and Verification of pure DNA samples </h1><br />
+
var rotationSpeed = 0.01;
−
    <p style="font-family:avenir;font-size:18px;">In the results below, the following gene codes each is an indicator of a particular disease:</p>
+
−
    <table>
+
  
−
    <tr>
+
function changeBallSize(e) {
−
      <td class="font-weight-bold" style="font-family:avenir;font-size:18px;">Gene</td>
+
  ballWeight = parseFloat(e.value);
−
      <td class="font-weight-bold" style="font-family:avenir;font-size:18px;">Disease</td>
+
  document.getElementById("balls-value").innerHTML = ballWeight;
−
      <td class="font-weight-bold" style="font-family:avenir;font-size:18px;">gBlock Size (bp)</td>
+
}
−
    </tr>
+
−
    <tr>
+
−
      <td style="font-family:avenir;font-size:18px;">pcaA</td>
+
−
      <td style="font-family:avenir;font-size:18px;">Tuberculosis</td>
+
−
      <td style="font-family:avenir;font-size:18px;">455</td>
+
−
    </tr>
+
−
    <tr>
+
−
      <td style="font-family:avenir;font-size:18px;">HbcAg</td>
+
−
      <td style="font-family:avenir;font-size:18px;">Hepatitis B</td>
+
−
      <td style="font-family:avenir;font-size:18px;">537</td>
+
−
    </tr>
+
−
    <tr>
+
−
      <td style="font-family:avenir;font-size:18px;">IS481</td>
+
−
      <td style="font-family:avenir;font-size:18px;">Whooping Cough</td>
+
−
      <td style="font-family:avenir;font-size:18px;">509</td>
+
−
    </tr>
+
−
    <tr>
+
−
      <td style="font-family:avenir;font-size:18px;">ypo2088</td>
+
−
      <td style="font-family:avenir;font-size:18px;">Plague</td>
+
−
      <td style="font-family:avenir;font-size:18px;">585</td>
+
−
    </tr>
+
−
    </table>
+
−
    <p style="font-family:avenir;font-size:18px;">PCR-amplified gblocks of the respective genes were ligated to pJET vectors. E. coli were transformed with the ligated vectors using heat-shock. Three colonies from each bacteria plate were picked separately for inoculation and subsequent plasmid extraction and purification through minipreps. For DNA quantification and purity measurements, NanoDrop was used and one miniprep for each gene with high purity and concentration was selected to conduct the experiments that follow thereafter.
+
−
</p><br/><br/>
+
  
−
<h4 style="font-family:avenir;">NanoDrop Results of chosen Miniprep:
+
function changeLineFrequency(e) {
−
</h4><br/>
+
  lineFreq = parseFloat(e.value);
−
<table class="table" id="partsTable">
+
  document.getElementById("lines-freq").innerHTML = lineFreq;
−
    <tbody>
+
}
−
        <thead class="c6">
+
−
            <th class="c13" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c15">Gene/Miniprep</span></p>
+
−
            </th>
+
−
            <th class="c8" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c15">Concentration</span></p>
+
−
                <p class="c5"><span class="c15">(ng/μl)</span></p>
+
−
            </th>
+
−
            <th class="c12" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c15">260/280</span></p>
+
−
            </th>
+
−
            <th class="c10" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c15">260/230</span></p>
+
−
            </th>
+
−
        </thead>
+
−
        <tr class="c6">
+
−
            <td class="c13" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c2">
+
−
IS481 sample 2
+
−
</span></p>
+
−
            </td>
+
−
            <td class="c8" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">
+
−
129.7
+
−
</span></p>
+
−
            </td>
+
−
            <td class="c12" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">
+
−
1.89
+
−
</span></p>
+
−
            </td>
+
−
            <td class="c10" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">2.24</span></p>
+
−
            </td>
+
−
        </tr>
+
−
        <tr class="c6">
+
−
            <td class="c13" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c2 c17">
+
−
HBcAg sample 2
+
−
</span></p>
+
−
            </td>
+
−
            <td class="c8" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">90.0</span></p>
+
−
            </td>
+
−
            <td class="c12" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">1.92</span></p>
+
−
            </td>
+
−
            <td class="c10" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">2.28</span></p>
+
−
            </td>
+
−
        </tr>
+
−
        <tr class="c6">
+
−
            <td class="c13" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c2">ypo2088 sample 3</span></p>
+
−
            </td>
+
−
            <td class="c8" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">77.5</span></p>
+
−
            </td>
+
−
            <td class="c12" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">1.93</span></p>
+
−
            </td>
+
−
            <td class="c10" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">2.32</span></p>
+
−
            </td>
+
−
        </tr>
+
−
        <tr class="c6">
+
−
            <td class="c13" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c2">
+
−
pcaA sample 3
+
−
</span></p>
+
−
            </td>
+
−
            <td class="c8" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">
+
−
111.9
+
−
</span></p>
+
−
            </td>
+
−
            <td class="c12" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">1.93</span></p>
+
−
            </td>
+
−
            <td class="c10" colspannop="1" romeno="1">
+
−
                <p class="c5"><span class="c0">2.26</span></p>
+
−
            </td>
+
−
        </tr>
+
  
−
    </tbody>
+
function changeLineSize(e) {
−
</table>
+
  lineWeight = parseFloat(e.value);
−
<small style="font-family:avenir;font-size:13px;">Table 1: Summary of Nanodrop results for the genes selected for further experimentation.</small>
+
  document.getElementById("lines-value").innerHTML = lineWeight;
−
<br/><br/>
+
}
−
<p style="font-family:avenir;font-size:18px;">Moreover, all miniprepped samples were PCR amplified to ensure the incorporation of the correct target gene into the plasmid DNA.
+
−
</p><br/><br/>
+
−
<!-- figure 1 goes here  -->
+
−
<img src="https://2019.igem.org/wiki/images/1/1b/T--NYU_Abu_Dhabi--Results1.png" class="img-fluid" />
+
−
<small style="font-family:avenir;font-size:13px;">
+
−
  Figure 1: PCR amplification of miniprepped samples of pcaA, HBcAg, and IS481 for quality control. (‘MP’ stands for Miniprep, IS481* refers to IS481 minipreps derived from ligation and transformation from a previous IS481 miniprep sample )</small><br/>
+
−
<br/><br/>
+
−
<img src="https://2019.igem.org/wiki/images/thumb/9/9b/T--NYU_Abu_Dhabi--results3.png/879px-T--NYU_Abu_Dhabi--results3.png" class="img-fluid" /><br />
+
−
<small style="font-family:avenir;font-size:13px;">
+
−
  Figure 2: PCR amplification of genes with pJET to verify ligation (ypo2088).
+
−
  Left to right: 500bp Ladder, negative control, ypo2088 Miniprep 1, ypo2088 Miniprep 2, ypo2088 Miniprep 3
+
−
</small><br/><br/>
+
  
−
<p style="font-family:avenir;font-size:18px;">The electrophoresis results show bands that match the gBlock lengths for the following miniprep samples:</p><br/>
+
function changeRotationSpeed(e) {
−
<ul>
+
  rotationSpeed = parseFloat(e.value);
−
<li style="font-family:avenir;font-size:18px;">pcaA miniprep 1</li>
+
  document.getElementById("rotation-speed").innerHTML = rotationSpeed;
−
<li style="font-family:avenir;font-size:18px;">hbcAg minipreps 1, 2, and 3</li>
+
}
−
<li style="font-family:avenir;font-size:18px;">IS481 minipreps 1 and 2</li>
+
−
<li style="font-family:avenir;font-size:18px;">Ypo2088 minipreps 1, 2, and 3</li>
+
−
</ul>
+
−
<br/><br/>
+
−
<p style="font-family:avenir;font-size:18px;">
+
−
Hence, we concluded that the clear bands present at around 500 bp for these miniprep samples, obtained through PCR primers specific for each gene, confirmed that they are properly incorporated into the plasmid DNA. Therefore, these samples were used in further experimentation. Those with no corresponding amplicon lengths were subsequently discarded.
+
−
    <br/><br/>
+
  
 +
function init() {
 +
  canvas = document.getElementById("helixCanvas");
 +
  canvas.width = 2000;
 +
  canvas.height = 800;
 +
  ctx = canvas.getContext("2d");
  
−
<small id="sensitivity" style="font-family:avenir;font-size:13px;">
 
−
  </small>
 
−
 
 
−
<h1>Sensitivity Test with Polymerase Chain Reaction (PCR) and Recombinase Polymerase Amplification (RPA)
 
−
</h1><br/><br/><br/>
 
−
<p style="font-family:avenir;font-size:18px;">The sensitivity of RPA with our genes was tested by conducting RPA reactions on serial dilutions of 60 ng/μl, 25 ng/μl, 10 ng/μl, 5 ng/μl, 1 ng/μl, 0.1 ng/μl, 0.01 ng/μl, and 0.001 ng/μl. The same serial dilutions were also used in the PCR reactions as a standard for comparison with RPA.
 
−
</p><br/><br/>
 
−
<table class="c24">
 
−
    <tbody>
 
−
        <tr class="c11">
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c19"><span class="c2"></span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span class="c2">PCR</span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span class="c2">RPA</span></p>
 
−
            </td>
 
−
        </tr>
 
−
        <tr class="c26">
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span class="c2">pcaA (Tuberculosis)</span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span ><img alt="" src="https://2019.igem.org/wiki/images/6/65/T--NYU_Abu_Dhabi--results4.png" class="img-fluid"  title=""></span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span><img alt="" src="https://2019.igem.org/wiki/images/4/41/T--NYU_Abu_Dhabi--results5.png"  class="img-fluid" title=""></span></p>
 
−
            </td>
 
−
        </tr>
 
−
        <tr class="c11">
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span class="c2">HBcAg (Hepatitis B)</span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c5 c9"><span style_not="overflow: hidden; display: inline-block; margin: 0.00px 0.00px; border: 0.00px solid #000000; transform: rotate(0.00rad) translateZ(0px); -webkit-transform: rotate(0.00rad) translateZ(0px); width: 194.00px; height: 105.33px;"><img alt="" src="https://2019.igem.org/wiki/images/0/01/T--NYU_Abu_Dhabi--results6.png" class="img-fluid" title=""></span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c5 c9"><span style_not="overflow: hidden; display: inline-block; margin: 0.00px 0.00px; border: 0.00px solid #000000; transform: rotate(0.00rad) translateZ(0px); -webkit-transform: rotate(0.00rad) translateZ(0px); width: 194.00px; height: 137.33px;"><img alt="" src="https://2019.igem.org/wiki/images/0/04/T--NYU_Abu_Dhabi--results7.png" class="img-fluid"  title=""></span></p>
 
−
            </td>
 
−
        </tr>
 
−
        <tr class="c11">
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span class="c2">IS481 (Whooping cough)</span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c5 c9"><span style_not="overflow: hidden; display: inline-block; margin: 0.00px 0.00px; border: 0.00px solid #000000; transform: rotate(0.00rad) translateZ(0px); -webkit-transform: rotate(0.00rad) translateZ(0px); width: 194.00px; height: 137.33px;"><img alt="" src="
 
−
https://2019.igem.org/wiki/images/6/67/T--NYU_Abu_Dhabi--results8.png
 
−
" class="img-fluid" title=""></span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c5 c9"><span style_not="overflow: hidden; display: inline-block; margin: 0.00px 0.00px; border: 0.00px solid #000000; transform: rotate(0.00rad) translateZ(0px); -webkit-transform: rotate(0.00rad) translateZ(0px); width: 194.00px; height: 137.33px;"><img alt="" src="https://2019.igem.org/wiki/images/a/ab/T--NYU_Abu_Dhabi--resultsbio3.png" class="img-fluid" title=""></span></p>
 
−
            </td>
 
−
        </tr>
 
−
        <tr class="c11">
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c20"><span class="c2">ypo2088 (Plague)</span></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c19"><img src="https://2019.igem.org/wiki/images/f/fe/T--NYU_Abu_Dhabi--resultsbio4.png" class="img-fluid" /></p>
 
−
            </td>
 
−
            <td class="c4" colspannop="1" romeno="1">
 
−
                <p class="c19"><span class="c2">
 
  
−
                </span></p>
+
  height = canvas.height;
−
            </td>
+
   width = canvas.width;
−
        </tr>
+
  xAxis = 400;
−
    </tbody>
+
  yAxis = 0;
−
</table>
+
  ctx.save();
−
<small style="font-family:avenir;font-size:13px;">
+
  draw();
−
Table 2: Comparison of PCR and RPA sensitivity on all genes. For each gene, PCR and RPA was performed on the following serial dilutions: 60 ng/μl, 25 ng/μl, 10 ng/μl, 5 ng/μl, 1 ng/μl, 0.1 ng/μl, 0.01 ng/μl, 0.001 ng/μl as well as negative control
+
}
−
   </small><br /><br/>
+
−
<p style="font-family:avenir;font-size:18px;">The length of the RPA amplicons are summarized below:</p><br />
+
−
<ul>
+
−
<li style="font-family:avenir;font-size:18px;">pcaA: 158 bp</li>
+
−
<li style="font-family:avenir;font-size:18px;">HBcAg:</li>
+
−
<li style="font-family:avenir;font-size:18px;">IS481:</li>
+
−
<li style="font-family:avenir;font-size:18px;">Ypo2088: 98 bp</li>
+
−
</ul><br /><br />
+
−
<p>&nbsp;</p>
+
−
<table>
+
−
<tbody>
+
−
<tr>
+
−
<td>
+
−
<p><span style="font-weight: 400;">Genes</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">PCR sensitivity limit (ng/</span><span style="font-weight: 400;">&mu;l)</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">RPA sensitivity limit (ng/</span><span style="font-weight: 400;">&mu;l)</span></p>
+
−
</td>
+
−
</tr>
+
−
<tr>
+
−
<td>
+
−
<p><span style="font-weight: 400;">pcaA</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">5</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">1</span></p>
+
−
</td>
+
−
</tr>
+
−
<tr>
+
−
<td>
+
−
<p><span style="font-weight: 400;">HbcAg</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">1</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">0.001</span></p>
+
−
</td>
+
−
</tr>
+
−
<tr>
+
−
<td>
+
−
<p><span style="font-weight: 400;">IS481</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">0.1</span></p>
+
−
</td>
+
−
<td>
+
−
<p><span style="font-weight: 400;">0.001</span></p>
+
−
</td>
+
−
</tr>
+
−
<tr>
+
−
<td>
+
−
<p><span style="font-weight: 400;">ypo2088</span></p>
+
−
</td>
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−
<td>
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−
<p><span style="font-weight: 400;">1</span></p>
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</td>
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−
<td>
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<p><span style="font-weight: 400;">0.01</span></p>
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</td>
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</tr>
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</tbody>
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−
<small style="font-family:avenir;font-size:13px;">Table 3: Sensitivity limit comparison between PCR and RPA amplifications of serial-diluted plasmid DNA</small>
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<br/><br/>
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<p style="font-family:avenir;font-size:18px;">In all cases, RPA exhibited higher sensitivity compared to PCR. This is important in the functionality of Volatect, as it gives the device stronger capability to pick up on genetic markers of communicative diseases over traditional amplification techniques (PCR) currently in use. The high sensitivity of RPA allows Volatect to amplify DNA and detect pathogens in saliva even when the concentration of the bacteria/viruses is low, hence boosting concentration of target genes for CRISPR activation.
+
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</p><br /><br />
+
  
−
<h1 id="dna">DNA Amplification Verification Using SYBR Green </h1>
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<p style="font-family:avenir;font-size:18px;">During the second phase of our project, we optimized the SYBR green concentration from the 2018 iGEM NYUAD team to utilize its property as a fluorescent nucleic acid stain to verify RPA reactions ran on microfluidic chip prototypes. In order to cater to the volume requirements of the engineering team’s microfluidic chip with the wet laboratory experiments, we greatly modified the RPA protocol from the original one by TwistDX to one that utilizes the volumes that can fit within the tubes of the chip. This new protocol utilizes 15 μl of RPA TwistAmp Basic Mastermix and 4 μl of DNA.
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I0.56µL of 1000X SYBR Green was added to an IS481 (Whooping Cough) RPA sample following the new protocol in accordance with the engineering team’s requirements.
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<td style="font-family:avenir;font-size:18px;">Agarose Gel Electrophoresis Result</td>
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<td style="font-family:avenir;font-size:18px;">Fluorescence Test Using SYBR Green</td>
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<small style="font-family:avenir;font-size:13px;">Table 4: Verification of RPA amplification using 1000x SYBR green. Fluorescence was observed only in the samples where the DNA was amplified (as indicated by the presence of bands in the gel). No fluorescence was indicated in the negative control where DNA was not amplified.</small><br/><br/>
+
−
<p style="font-family:avenir;font-size:18px;">
+
−
  As shown by the gel results and the results under UV light, the fluorescence was apparent only in the tubes where the RPA segment was amplified, and no fluorescence appeared when no bands appeared (in the negative control sample). This experiment verified the viability of SYBR green can be used to determine if the DNA segment was amplified by RPA.
+
−
</p><p style="font-family:avenir;font-size:18px;">
+
−
  Next, SYBR green was further diluted to a final concentration of 1.25X and tested on the serial dilutions of ypo2088 to assess if it can be used to detect DNA amplification at different concentrations (serial dilutions) of DNA.
+
−
</p><br/><br/>
+
−
<br/><br/>
+
−
<img src="https://2019.igem.org/wiki/images/5/51/T--NYU_Abu_Dhabi--results333.png" class="img-fluid" /><br/>
+
−
<small style="font-family:avenir;font-size:13px;">Figure 5: Using 25X SYBR green to detect DNA amplification using RPA for all serial dilutions (ypo2088).
+
−
</small><br/><br/>
+
−
<p style="font-family:avenir;font-size:18px;">As per the figure, SYBR green only showed fluorescence in all the serial dilutions samples containing DNA (with various concentrations). Since these samples fluoresced using only 1μl of SYBR green from a 25x stock, this can reduce the amount needed for amplification detection and reduce the cost in the device.
+
−
</p><br/><br/>
+
−
<h1 id="test">Test Using Bacteria from LB broth</h1><br/><br/>
+
−
<p style="font-family:avenir;font-size:18px;">To emulate the scenario of collecting a saliva sample containing bacteria, we performed PCR and RPA experiments directly on bacteria obtained from LB broth. The amplification was tested using the optimized amount of SYBR green.
+
−
</p><br/><br/>
+
  
−
<h4 style="font-family:avenir;">Broth PCR for IS481 and HBcAg</h4><br/>
 
−
<img src="https://2019.igem.org/wiki/images/3/3e/T--NYU_Abu_Dhabi--resultsbio55.png" class="img-fluid" />
 
−
<br/>
 
−
<small style="font-family:avenir;font-size:13px;">Figure 4: SYBR green fluorescence of PCR samples using bacteria from broth.</small>
 
−
<br/><br/>
 
−
<p style="font-family:avenir;font-size:18px;">
 
−
  The SYBR green fluorescence of the negative control (which contains no DNA) was significantly lower than that of the serial dilutions, indicating that DNA was sufficiently amplified. These results with HBcAg and IS481 offer a proof of concept (that also applies to the other disease genes) which verifies that Volatect, which utilizes RPA, is capable of running tests on saliva samples without the need to lyse bacteria using any buffers.
 
−
</p>
 
−
<h1 id="detect">Detection Using CRISPR-Cas12a</h1>
 
−
<br/><br/>
 
−
<p style="font-family:avenir;font-size:18px;">
 
−
After the required concentration and volume of the FQ quencher was optimized, the fluorescence using the quencher was tested on both PCR and RPA samples for two reasons: to verify that the DETECTR protocol used by Volatect (RPA+CRISPR+FQ quencher) is functional and to compare the RPA amplification with the currently-used PCR method.
 
−
</p><br/><br/>
 
  
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<small style="font-family:avenir;font-size:13px;">
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Figure 5: Comparison of fluorescence intensity and detection using CRISPR coupled with RPA and with PCR. The results show that the sensitivity of RPA was higher, and a higher fluorescence intensity was observed until 0.001 ng/μl when using RPA with CRISPR.
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Top- RPA:60 ng/ul dilution- 25ng/ul dilution- 10 ng/ul dilution- 5 ng/ul dilution- 1 ng/ul dilution- 0.1 ng/ul dilution- 0.01 ng/ul dilution- 0.01 ng/ul dilution
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Bottom- PCR:60 ng/ul dilution- 25ng/ul dilution- 10 ng/ul dilution- 5 ng/ul dilution- 1 ng/ul dilution- 0.1 ng/ul dilution- 0.01 ng/ul dilution- 0.01 ng/ul dilution
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</small>
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<br/><br/>
+
−
<p style="font-family:avenir;font-size:18px;">
+
−
Figure 5 above shows that the sensitivity of RPA (up to 0.001 ng/μl) was higher than that of PCR (up to 0.1 ng/μl) and the fluorescence was more intense for the RPA samples coupled with CRISPR and quencher compared to PCR. This proves that the protocol utilized by Volatect for pathogen detection, DETECTR, is more sensitive the PCR technique currently used.
+
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</p><br/>
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<p style="font-family:avenir;font-size:18px;">
+
−
The fluorescence is an indication that the guide RNAs of CRISPR were successfully bound to the target DNA/gene (in this case, IS481). The strong fluorescence of RPA allows the sensors in the device to easily detect the fluorescence when the target pathogen genes are present, making the device as a whole sensitive. This experiment also shows that Volatect can be a reliable tool for testing for presence of pathogens in saliva even when present in small concentrations.
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    <h1 class="headingTextBioEngineering" style="font-size: 5vw;font-family:avenir">Microfluidics</h1>
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Microfluidics unites the reliability of lab tests with the  integrated efficiency of a printed circuit board. It tackles the challenges of controlling fluid flow in micromillimeters sized channel geometries and facilitating complex on-chip biological protocols both spatially and temporally.  In accordance with the international trends of integrating technologies to ensure reliable use, scalability and user availability, Volatect's chip is the result of improving multiple iterations on iGEM's diagnostics track over the years and a pursuit of high standards both in signal quality and chemical contamination prevention.
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            In future studies, we aim to expand the detection range of Volatect to include RNA viruses, which are the cause of several travel illnesses and epidemics (ex: Ebola and HIV). In order to do this, we plan to use a variant of our CRISPR reagent, CRISPR-Cas13, which can detect RNA accurately. The technique we will use, called SHERLOCK, is based on the protocol titled “Nucleic acid detection with CRISPR-Cas13a/C2c2,” which provides “rapid DNA or RNA detection with attomolar sensitivity and single-base mismatch specificity.” The protocol illustrates the proof-of-concept whereby SHERLOCK is able to detect specific strains of Zika and Dengue virus. Like DETECTR (the protocol utilized by Volatect), SHERLOCK also relies on the use of a cleavage reporter to indicate the presence of the target nucleic acid. In addition, our collection method should include adding a buffer able to lyse viruses. <br/>
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  Click here for the SHERLOCK protocol:<br/>
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  <a href="https://science.sciencemag.org/content/356/6336/438/tab-pdf">https://science.sciencemag.org/content/356/6336/438/tab-pdf</a>
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            <p style="font-family:avenir;font-size:18px;">If the experiments were repeated, some steps need to be considered by the experimenters:</p><br/>
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    The concentrations of SYBR green and FQ quencher must be adjusted depending on the total volume of the sample (whether PCR or RPA) to determine the one that results in the least background fluorescence.
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  The type of guide RNAs used for CRISPR detection must be consistent with the Cas enzyme used. For instance, if using the LbCas12a enzyme, Lb guides must be used for the guide RNAs to bind to the target DNA and release fluorescence.
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<script>
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    $(function () {
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    setRandomClass();
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setInterval(function () {
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    setRandomClass();
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}, 4000);//number of milliseconds (2000 = 2 seconds)
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    });
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function setRandomClass() {
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    var ul = $("svg");
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    var items = ul.find("circle");
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    var number = items.length;
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  //alert("yolo");
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    items.removeClass("banaan");
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  }
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}
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</script>
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    </div><div id="featureInfoHolder" class="col-sm-5 my-auto">
 +
    <h1 class="headingTextBioEngineering" style="font-size: 5vw;">WEB API</h1>
 +
    <p class="gradientText" style="font-size: 1.5vw;">
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      An API (Application Programming Interface) simply put is a way for applications to communicate with each other. The Volatect API is intended to be used by medical researchers. We believe that the data that comes out of air travel disease reports from our device could help immensely in the analysis and prediction of outbreaks around the world as we provide disease diagnosis in relation to the nationality and the flight path of the passengers.
 +
    </p><button class="btn btn-primary engineeringbiobutton" type="button">Learn more</button></div>
  
 
</div>
 
</div>
  
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        <!-- Start: Fade2Black -->
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<style>
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    @import "compass/css3";
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    .headingTextBioEngineering {
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        color:#fdcc52;
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.gradientText {
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font-size: 2vw;
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  background: #8A2387;
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  background: -webkit-linear-gradient(to right, #C8C8C8 , #FFFFFF, #C8C8C8 );
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  background: linear-gradient(to right,#C8C8C8 , #FFFFFF, #C8C8C8);
  
−
     <!-- End: Article Clean -->
+
  -webkit-background-clip: text;
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  color: transparent;
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}
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    #engineeringbio {
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        opacity:0;
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    }
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    .engineeringbiobutton {
 +
      background:black;
 +
      border-color:#fdcc52;
 +
      display:none;
 +
     }
 +
</style><script>
 +
 
 +
    $(function () {
 +
        var controller3 = new ScrollMagic.Controller();
 +
        var tweenFadeIn = TweenMax.to("#engineeringbio", 1, {backgroundColor:"black",opacity:1});
 +
        var fadeoutvideo = TweenMax.to("#myVideo", 1, {opacity:"0"});
 +
        var tweenStepsFadeIn = TweenMax.to("#volatectSteps", 1, {backgroundColor:"black"});
 +
        var tweenRotate = TweenMax.to("#canvas-container", 1, {scale:"0.9",rotation:0});
 +
        var tweenMicro =TweenMax.to("#microfluidics", 1, {scale:"1.5"});          //volatectSteps
 +
      // var tween2 = TweenMax.to("#productImage", 1000, {rotation:"360"});
 +
        var timelineProductAnimation2 = new TimelineMax().add(fadeoutvideo,"f").add(tweenRotate,"f").add(tweenMicro,"f");
 +
        var sceneBack = new ScrollMagic.Scene({ duration:"200px",offset:"0"})
 +
        .triggerElement("#engineeringbio")
 +
        .setTween(timelineProductAnimation2)
 +
                        //.addIndicators({name: "engineering"}) // add indicators (requires plugin)
 +
                        .addTo(controller3);
 +
    });
 +
 
 +
 
 +
</script>
 +
 
 +
        <!-- End: Fade2Black -->
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        <!-- Start: ScrollFeatures --><script>
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 +
    $(function () {
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        $("#featuresHeaderText").css("display", "none");
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        $("#middleFeatureContainer").css("display", "none");
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        $("#microfluidicsContainer").css("display", "none");
 +
        $("#webapiHolder").css("display", "none");
 +
 
 +
        var controller4 = new ScrollMagic.Controller();
 +
        var timelineFeatures = new TimelineMax()
 +
        .add(TweenMax.to("#featuresHeaderText", 20, {opacity:1,top:"35%"}))
 +
        .add(TweenMax.to("#featuresHeaderText", 20, {opacity:0,top:"35%"}))
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        .add(TweenMax.to("#featuresHeaderText", 1, {display:"none"}))
 +
        .add(TweenMax.to("#middleFeatureContainer", 50, {opacity:1,top:"7%"}),"q")
 +
        .add(TweenMax.to("#middleFeatureContainer", 10, {opacity:0}))
 +
        .add(TweenMax.to("#middleFeatureContainer", 1, {display:"none"}))
 +
        .add(TweenMax.to("#microfluidicsContainer", 50, {opacity:1,top:"7%"}))
 +
        .add(TweenMax.to("#microfluidicsContainer", 10, {opacity:0}))
 +
        .add(TweenMax.to("#microfluidicsContainer", 1, {display:"none"}))
 +
        .add(TweenMax.to("#webapiHolder", 50, {opacity:1,top:"7%"}))
 +
        .add(TweenMax.to("#webapiHolder", 10, {opacity:0,display:"none"}),"last")
 +
        .add(TweenMax.to("#webapiHolder", 1, {display:"none"}))
 +
 
 +
        //microfluidicsContainer webapiHolder
 +
        var sceneBack2 = new ScrollMagic.Scene({ duration:"500%",offset:0})
 +
        .setTween(timelineFeatures)
 +
        .triggerElement("#engineeringbio")
 +
        .on("start", () => {
 +
            $("#featuresHeaderText").css("display", "");
 +
        $("#middleFeatureContainer").css("display", "");
 +
        $("#microfluidicsContainer").css("display", "");
 +
        $("#webapiHolder").css("display", "");
 +
        })
 +
        .on("leave", () => {
 +
          $("#featuresHeaderText").css("display", "none");
 +
        $("#middleFeatureContainer").css("display", "none");
 +
        $("#microfluidicsContainer").css("display", "none");
 +
        $("#webapiHolder").css("display", "none");
 +
        })
 +
        .on("end", () => {
 +
          $("#featuresHeaderText").css("display", "none");
 +
        $("#middleFeatureContainer").css("display", "none");
 +
        $("#microfluidicsContainer").css("display", "none");
 +
        $("#webapiHolder").css("display", "none");
 +
        })
 +
      //.setPin("body")
 +
                        //.addIndicators({name: "engineering"}) // add indicators (requires plugin)
 +
                        .addTo(controller4);
 +
    });
 +
 
 +
 
 +
</script>
 +
 
 +
        <!-- End: ScrollFeatures -->
 +
    </div>
 +
    <!-- End: Features Desktop -->
 +
    <!-- Start: Features Mobile --><section id="features" class="features d-block d-lg-none" style=" background:url('assets/img/bg-pattern.png'), linear-gradient(to left, #cecccc, #fdfffc, #fdfffc, #cecccc);">
 +
 
 +
 
 +
    <div class="container">
 +
        <div class="section-heading text-center">
 +
            <h2 style="">State-of-the-art Biology and Engineering</h2>
 +
 
 +
            <hr />
 +
        </div>
 +
        <div class="row">
 +
 
 +
            <div class="col-lg-8 my-auto">
 +
                <div class="container-fluid">
 +
                    <div class="row">
 +
                        <div class="col-lg-6">
 +
                            <div class="feature-item" style=""><img src="https://2019.igem.org/wiki/images/e/e9/T--NYU_Abu_Dhabi--crispranimation.gif" class="img-fluid"/></i>
 +
                                <h3>CRISPR</h3>
 +
                                <p class="text-muted">
 +
                                  CRISPR technology is a simple yet powerful tool for editing genomes. It allows researchers to easily alter DNA sequences and modify gene function. Its many potential applications include correcting genetic defects, treating and preventing
 +
                                      the spread of diseases and improving crops. However, its promise also raises ethical concerns.In popular usage, "CRISPR" (pronounced "crisper") is shorthand for "CRISPR-Cas9." CRISPRs are specialized stretches of DNA. The protein
 +
                                      Cas9 (or "CRISPR-associated") is an enzyme that acts like a pair of molecular scissors, capable of cutting strands of DNA.
 +
                                </p></div>
 +
                            <div class="Push-20"></div>
 +
                        </div>
 +
                        <div class="col-lg-6">
 +
                            <div class="feature-item" style="">
 +
                              <img src="https://2019.igem.org/wiki/images/a/a7/T--NYU_Abu_Dhabi--microfluidicsmobile.gif" class="img-fluid" />
 +
                            </i>
 +
                                <h3>Microfluidics</h3>
 +
                                <p class="text-muted">
 +
Microfluidics unites the reliability of lab tests with the  integrated efficiency of a printed circuit board. It tackles the challenges of controlling fluid flow in micromillimeters sized channel geometries and facilitating complex on-chip biological protocols both spatially and temporally.  In accordance with the international trends of integrating technologies to ensure reliable use, scalability and user availability, Volatect's chip is the result of improving multiple iterations on iGEM's diagnostics track over the years and a pursuit of high standards both in signal quality and chemical contamination prevention.
 +
                                </p></div>
 +
                            <div class="Push-20"></div>
 +
                        </div>
 +
                        <div class="col-lg-6">
 +
                            <div class="feature-item" style=""><img src="https://2019.igem.org/wiki/images/1/10/T--NYU_Abu_Dhabi--webapimob.gif" class="img-fluid" /></i>
 +
                                <h3>Volatect API</h3>
 +
                                <p class="text-muted">
 +
We built a WEB API that allows secure access to the data we collect using our device. Medical researchers can now use the data we collect from passengers in airports to predict and report disease outbreaks before they happen.&nbsp;
 +
                                </p></div>
 +
                            <div class="Push-20"></div>
 +
                        </div>
 +
                    </div>
 +
                </div>
 +
            </div>
 +
        </div>
 +
    </div>
 +
</section>
 +
    <!-- End: Features Mobile -->
 +
    <!-- Start: WEB API MOBILE -->
 +
<div style="display:none;"></div>
 +
    <!-- End: WEB API MOBILE -->
 +
    <section id="socialContainer" class="contact" style="background-color: #fdfffc;">
 +
        <div class="container" style="background-color: #fdfffc;">
 +
            <h2><span>We&nbsp;</span><i class="fa fa-heart" id="heart_icon"></i><span>&nbsp;new friends!</span></h2>
 +
            <ul class="list-inline list-social">
 +
                <li class="list-inline-item social-youtube"><a href="https://www.youtube.com/channel/UCQnySAKw67slX8T6r9bAcYw"><img src="https://2019.igem.org/wiki/images/9/91/T--NYU_Abu_Dhabi--_ytcircle.svg" width="80" height="80" ></a></li>
 +
                <li class="list-inline-item social-instagram"><a href="https://www.instagram.com/igem_nyuad/"><img src="https://2019.igem.org/wiki/images/3/3a/T--NYU_Abu_Dhabi--igicon.png" width="80" height="80"></a></li>
 +
                <li class="list-inline-item social-facebook"><a href="https://www.facebook.com/iGEMNYUAD/"><img src="https://2019.igem.org/wiki/images/thumb/2/2e/T--NYU_Abu_Dhabi--fblogo.png/240px-T--NYU_Abu_Dhabi--fblogo.png" width="80" height="80"></a></li>
 +
            </ul>
 +
        </div>
 +
    </section>
 
     <!-- Start: 2 Rows 1+4 Columns -->
 
     <!-- Start: 2 Rows 1+4 Columns -->
−
      <div id="footerContainer" style="background-color: white;color:black;">
+
    <div id="footerContainer" style="background-color: white;color:black;">
 
         <!-- Start: HeartAnimation -->
 
         <!-- Start: HeartAnimation -->
 
<script>
 
<script>
Line 724: Line 3,720:
  
 
                 <div class="col-md-3 col-xl-2 d-xl-flex justify-content-xl-center align-items-xl-center"><img class="img-fluid sponsor-logo" src="https://2019.igem.org/wiki/images/thumb/a/a5/T--NYU_Abu_Dhabi--NYU-logo.png/800px-T--NYU_Abu_Dhabi--NYU-logo.png"></div><div class="col-xl-2 d-lg-none mobile-space" ></div>
 
                 <div class="col-md-3 col-xl-2 d-xl-flex justify-content-xl-center align-items-xl-center"><img class="img-fluid sponsor-logo" src="https://2019.igem.org/wiki/images/thumb/a/a5/T--NYU_Abu_Dhabi--NYU-logo.png/800px-T--NYU_Abu_Dhabi--NYU-logo.png"></div><div class="col-xl-2 d-lg-none mobile-space" ></div>
 +
 +
                <div class="col-md-3 col-xl-2 d-xl-flex justify-content-xl-center align-items-xl-center"><img class="img-fluid sponsor-logo" src="https://2019.igem.org/wiki/images/0/06/T--NYU_Abu_Dhabi--3mlogo.png"></div><div class="col-xl-2 d-lg-none mobile-space" ></div>
 +
 +
                <div class="col-md-3 col-xl-2 d-xl-flex justify-content-xl-center align-items-xl-center"><img class="img-fluid sponsor-logo" src="https://2019.igem.org/wiki/images/c/c6/T--NYU_Abu_Dhabi--ansyslogo.png"></div><div class="col-xl-2 d-lg-none mobile-space" ></div>
 +
 +
                <div class="col-md-3 col-xl-2 d-xl-flex justify-content-xl-center align-items-xl-center"><img class="img-fluid sponsor-logo" src="https://2019.igem.org/wiki/images/0/0a/T--NYU_Abu_Dhabi--jklogo.png"></div><div class="col-xl-2 d-lg-none mobile-space" ></div>
 +
 +
                <div class="col-md-3 col-xl-2 d-xl-flex justify-content-xl-center align-items-xl-center"><img class="img-fluid sponsor-logo" src="https://2019.igem.org/wiki/images/e/ee/T--NYU_Abu_Dhabi--snapgenelogo.png"></div><div class="col-xl-2 d-lg-none mobile-space" ></div>
 +
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             </div>
Line 729: Line 3,735:
 
     </div>
 
     </div>
 
     <!-- End: 2 Rows 1+4 Columns -->
 
     <!-- End: 2 Rows 1+4 Columns -->
−
     <footer style="background:white;color:black;">
+
     <footer style="background-color: white; color:black;" class="text-center">
 
         <div class="container">
 
         <div class="container">
−
             <p>©&nbsp;Volatect 2019. All Rights Reserved.</p>
+
             <p class="text-center">©&nbsp;Volatect 2019. All Rights Reserved.</p>
−
            <ul class="list-inline" style="background:white;color:black;">
+
−
                <li class="list-inline-item"><a href="#" style="background:white;color:black;">Privacy</a></li>
+
−
                <li class="list-inline-item"><a href="#" style="background:white;color:black;">Terms</a></li>
+
−
                <li class="list-inline-item"><a href="#"  style="background:white;color:black;">FAQ</a></li>
+
−
            </μl>
+
 
         </div>
 
         </div>
 
     </footer>
 
     </footer>
−
     <script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/jquery?action=raw&ctype=text/javascript"></script>
+
     <div class="modal fade" role="dialog" tabindex="-1" id="crisprInfo">
−
    <script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/bootstrapjs?action=raw&ctype=text/javascript"></script>
+
        <div class="modal-dialog" role="document">
−
     <script src="https://2019.igem.org/Team:NYU_Abu_Dhabi/sampleScript?action=raw&ctype=text/javascript"></script>
+
            <div class="modal-content">
 +
                <div class="modal-header">
 +
                    <h4 class="modal-title">Learn More about Crispr and how we use it</h4><button type="button" class="close" data-dismiss="modal" aria-label="Close"><span aria-hidden="true">×</span></button></div>
 +
                <div class="modal-body">
 +
<div class="embed-responsive embed-responsive-16by9">
 +
  <iframe class="embed-responsive-item" src="https://www.youtube.com/embed/hyA6dSLlm7E?rel=0" allowfullscreen></iframe>
 +
</div>
 +
                    <p style="padding: 5px;">CRISPR technology is a simple yet powerful tool for editing genomes. It allows researchers to easily alter DNA sequences and modify gene function. Its many potential applications include correcting genetic defects, treating and preventing
 +
                        the spread of diseases and improving crops. However, its promise also raises ethical concerns.In popular usage, "CRISPR" (pronounced "crisper") is shorthand for "CRISPR-Cas9." CRISPRs are specialized stretches of DNA. The protein
 +
                        Cas9 (or "CRISPR-associated") is an enzyme that acts like a pair of molecular scissors, capable of cutting strands of DNA.<br></p>
 +
                </div>
 +
                <div class="modal-footer"><button class="btn btn-primary" type="button" data-dismiss="modal">Close</button></div>
 +
            </div>
 +
        </div>
 +
     </div>
 +
    <!-- Start: SmoothWheel Integration --> <script>
 +
      /*$(function(){
 +
 
 +
    var $window = $(window);        //Window object
 +
 
 +
    var scrollTime = 1.5;          //Scroll time
 +
    var scrollDistance = 200;      //Distance. Use smaller value for shorter scroll and greater value for longer scroll
 +
 
 +
    $window.on("mousewheel DOMMouseScroll", function(event){
 +
 
 +
        event.preventDefault();
 +
        var delta = event.originalEvent.wheelDelta/120 || -event.originalEvent.detail/3;
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 +
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 +
 
 +
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 +
                ease: Power1.easeOut,  //For more easing functions see https://api.greensock.com/js/com/greensock/easing/package-detail.html
 +
                autoKill: true,
 +
                overwrite: 5
 +
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 +
 
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});*/
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 +
    <!-- End: SmoothWheel Integration -->
 +
 
 +
 
 
</body>
 
</body>
  
 
</html>
 
</html>

Latest revision as of 03:18, 22 October 2019

Volatect

Meet Volatect. Flying safe starts by flying healthy.


REVOLUTIONIZING YOUR TRAVEL EXPERIENCE

Meet Volatect. A disease diagnostic device that works like magic. 

pre order

REVOLUTIONIZING YOUR TRAVEL EXPERIENCE

State of the art Engineering and Biology

Crispr

CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a genome-editing technology derived from the bacterial defense system strategy to cut the DNA of viruses and other invading bodies. The method we are utilizing, DETECTR, involves the use of CRISPR-Cas12a to accurately detect a DNA sequence and cut a fluorescent probe to release light upon detection.

Microfluidics

Microfluidics unites the reliability of lab tests with the integrated efficiency of a printed circuit board. It tackles the challenges of controlling fluid flow in micromillimeters sized channel geometries and facilitating complex on-chip biological protocols both spatially and temporally. In accordance with the international trends of integrating technologies to ensure reliable use, scalability and user availability, Volatect's chip is the result of improving multiple iterations on iGEM's diagnostics track over the years and a pursuit of high standards both in signal quality and chemical contamination prevention.

WEB API

An API (Application Programming Interface) simply put is a way for applications to communicate with each other. The Volatect API is intended to be used by medical researchers. We believe that the data that comes out of air travel disease reports from our device could help immensely in the analysis and prediction of outbreaks around the world as we provide disease diagnosis in relation to the nationality and the flight path of the passengers.

State-of-the-art Biology and Engineering

CRISPR

CRISPR technology is a simple yet powerful tool for editing genomes. It allows researchers to easily alter DNA sequences and modify gene function. Its many potential applications include correcting genetic defects, treating and preventing the spread of diseases and improving crops. However, its promise also raises ethical concerns.In popular usage, "CRISPR" (pronounced "crisper") is shorthand for "CRISPR-Cas9." CRISPRs are specialized stretches of DNA. The protein Cas9 (or "CRISPR-associated") is an enzyme that acts like a pair of molecular scissors, capable of cutting strands of DNA.

Microfluidics

Microfluidics unites the reliability of lab tests with the integrated efficiency of a printed circuit board. It tackles the challenges of controlling fluid flow in micromillimeters sized channel geometries and facilitating complex on-chip biological protocols both spatially and temporally. In accordance with the international trends of integrating technologies to ensure reliable use, scalability and user availability, Volatect's chip is the result of improving multiple iterations on iGEM's diagnostics track over the years and a pursuit of high standards both in signal quality and chemical contamination prevention.

Volatect API

We built a WEB API that allows secure access to the data we collect using our device. Medical researchers can now use the data we collect from passengers in airports to predict and report disease outbreaks before they happen. 

We  new friends!

© Volatect 2019. All Rights Reserved.