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Revision as of 12:32, 13 December 2019
Here you can find our basic parts.
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Name
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Type
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Description
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Length
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|---|---|---|---|---|
| BBa_K3009001 | Signalling | FPR2 receptor | 1059 bp | |
| BBa_K3009030 | DNA | MJ tyrosyl synthetase | 921 bp | |
| BBa_K3009031 | Protein | MCP | 363 bp | |
| BBa_K3009032 | RNA | MS2 loops | 129 bp | |
| BBa_K3009033 | Protein | SPD5 | 3594 bp | |
| BBa_K3009012 | Other | Aspartate Racemase (PhAspR) | 687 bp | |
| BBa_K3009013 | Other | DAAO | Length | |
This is our favorite basic part:
Spindle-deficient protein 5 derived from C.elegans is able to assemble into condensates that built a separate phase from the surronding cytosol, therefore emulating a reaction compartment. Fusion proteins will also be confined to this organelle.
SPD 5 proteins assemble into phase-separated condensates in the cytosol, building a dynamic artificial organelle. Fusion proteins of SPD5 will be confined inside the organelle and separated from the all other components inside the cell. Due to the lack of a membrane, all other molecules can freely move in and out of the organelle.
In C. elegans, SPD5 , forms condensates that aid the organization of microtubule arrays in the centrosome.
By expressing a SPD5:sfGFP fusion in E.coli, we have proven droplet formation in the E.coli cytosol.
Fig. 1: E.coli cells expressing a SPD5:sfGFP fusion verify droplet formation
To confirm that the constructs were were seeing were in fact dynamic droplets and not dead aggregates, we bleached several regions of interest with a 475 nm laser beam. Due to the dynamic nature of the droplets, flurescent should be recovered by diffusion of unbleached proteins
Fig.2 Recovery of fluorescence after photobleaching in SPD5:sfGFP expressing C321.deltaA cells.