Difference between revisions of "Safety/Check In"

 
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<p>You should submit a Check-In <strong>before you acquire or use certain materials in your lab.</strong> Specifically, you should send us a Check-In for any organism or part that is not on the <a href="https://2019.igem.org/Safety/White_List">White List</a>. We expect to reply to most Check-Ins within a few days at most.  
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 +
<p> You should submit a Check-In before you acquire or use certain materials in your lab or before you undertake certain types of activities. Specifically, you should send us a Check-In for any organism, part, or activity that is not on the <a href="https://2019.igem.org/Safety/White_List">White List</a>. We expect to reply to most Check-Ins within a few days. If you have not heard back from us in a week, please email <b>safety [at] igem.org</b>.
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</p>
 
</p>
  
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<p>Check-Ins are a way for you to quickly and easily ask iGEM's safety experts to review your plans for safely acquiring and using a higher risk organism/part, and to approve your plans or suggest changes.</p>
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<p>Check-Ins are a way for you to quickly and easily ask iGEM's safety experts to review your plans for safely acquiring and using a higher risk organism/part/activity, and to approve your plans or suggest changes.</p>
  
 
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<h4>We encourage STUDENTS, instead of instructors, to complete this form.</h4>
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<h4>We encourage STUDENTS, instead of instructors, to complete this form. Please provide as much detail as possible.</h4>
  
 
<p>
 
<p>
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Once the iGEM Safety Committee has approved your Check-In by email, you may begin working with the material (organism or part). You may Check-In for as many organisms/parts as you wish, and any team member may send a Check-In at any time until the Jamboree.</p>
+
Once the iGEM Safety and Security Committee has approved your Check-In by email, you may begin working with the material (organism or part) or activity. You may Check-In for as many organisms/parts as you wish, and any team member may send a Check-In at any time until the Jamboree.</p>
  
 
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<div class="title">Note </div>
 
<div class="title">Note </div>
 
</div>
 
</div>
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<p>While you type, this form will remember your answers. When you are finished, press the "Submit" button at the bottom to send your form to the iGEM Safety Committee.</p>
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<p>While you type, this form will remember your answers. When you are finished, press the "Submit" button at the bottom to send your form to the iGEM Safety Committee.
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<p>If you <strong>need help</strong>, or if you are <strong>unsure</strong> whether an organism/part requires a Check-In, email safety (at) igem (dot) org to ask.</p>
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<br>
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If you need help, or if you are unsure whether an organism/part requires a Check-In, email safety (at) igem (dot) org to ask.
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</p>
  
 
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<h5> What if I am unsure whether my organism/part requires a Check-In?</h5>
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<h4>What if I am unsure whether my organism/part requires a Check-In?</h4>
 
<p>Ask us! Email safety AT igem DOT org to ask questions about what requires a Check-In. Or, because the Check-In form is short and easy, you can submit a Check-In even if you are unsure whether it is necessary.</p>
 
<p>Ask us! Email safety AT igem DOT org to ask questions about what requires a Check-In. Or, because the Check-In form is short and easy, you can submit a Check-In even if you are unsure whether it is necessary.</p>
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<br>  
 
<br>  
  
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<h5>We want to do a little preliminary work with an organism/part, but we might not use it for our final project. Do we still have to Check-In before we acquire the organism/part?</h5>
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<h4>We want to do a little preliminary work with an organism/part, but we might not use it for our final project. Do we still have to Check-In before we acquire the organism/part?</h4>
 
<p>Yes! Please Check-In for every organism/part you want to acquire that is not on the White List, even if you will not use it in your final project. You can tell us in the "Further Comments" section that it is not for your final project, or that you are unsure. We have made the Check-In form short and easy, so you can Check-In for many parts, even ones you are not sure about using.</p>
 
<p>Yes! Please Check-In for every organism/part you want to acquire that is not on the White List, even if you will not use it in your final project. You can tell us in the "Further Comments" section that it is not for your final project, or that you are unsure. We have made the Check-In form short and easy, so you can Check-In for many parts, even ones you are not sure about using.</p>
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</h4>
  
 
<br>
 
<br>
  
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<h5>Uh-oh! We misunderstood the White List, and we already started working with an organism/part that requires a Check-In. What do we do?</h5>
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<h4>Uh-oh! We misunderstood the White List, and we already started working with an organism/part that requires a Check-In. What do we do?</h4>
 
<p>Just let us know. Email safety AT igem DOT org to describe the situation, and send us a Check-In promptly. Tell us in the "Further Comments" section what you have done with the organism/part already.</p>
 
<p>Just let us know. Email safety AT igem DOT org to describe the situation, and send us a Check-In promptly. Tell us in the "Further Comments" section what you have done with the organism/part already.</p>
  
  
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<h5> We are going to use a lot of parts. May we combine them on a single Check-In?</h5>
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<br>
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<h4>We are going to use a lot of parts. May we combine them on a single Check-In?</h4>
 
<p>If the parts all come from the same parent organism, you may combine them on a single Check-In, but make sure you give complete information about each part. If the parts come from different parent organisms, please send separate Check-Ins.</p>
 
<p>If the parts all come from the same parent organism, you may combine them on a single Check-In, but make sure you give complete information about each part. If the parts come from different parent organisms, please send separate Check-Ins.</p>
  
 
<br>
 
<br>
  
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<h5> You approved our Check-In for an organism/part. Do we still need to ask our university/institution about it? What about checking local laws?</h5>
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<h4>You approved our Check-In for an organism/part. Do we still need to ask our university/institution about it? What about checking local laws?</h4>
 
<p>Yes! The iGEM Safety Committee does not replace institutional review boards, or your local government. You are responsible for obtaining from your university or government any approvals that might be necessary. Your university or government might have different rules about what organisms/parts require special approval.</p>
 
<p>Yes! The iGEM Safety Committee does not replace institutional review boards, or your local government. You are responsible for obtaining from your university or government any approvals that might be necessary. Your university or government might have different rules about what organisms/parts require special approval.</p>
  
 
<br>
 
<br>
  
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<h5>We are only using organisms/parts from the White List, and therefore we do not need to submit any Check-Ins. Do we still need to ask our university/institution about our project? What about checking local laws?</h5>
+
<h4>We are only using organisms/parts from the White List, and therefore we do not need to submit any Check-Ins. Do we still need to ask our university/institution about our project? What about checking local laws?</h4>
 
<p>Yes! Again, the iGEM Safety Committee does not replace institutional review boards, or your local government. Even if you are only using organisms/parts that are generally considered "safe", you still have the responsibility to follow good laboratory procedures. Also, you are responsible for ensuring that your project complies with the rules of your university/institution, and with the laws of your nation.</p>
 
<p>Yes! Again, the iGEM Safety Committee does not replace institutional review boards, or your local government. Even if you are only using organisms/parts that are generally considered "safe", you still have the responsibility to follow good laboratory procedures. Also, you are responsible for ensuring that your project complies with the rules of your university/institution, and with the laws of your nation.</p>
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<div class="details">
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<span class="icon notice"></span>
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<div class="title">Opening Day </div>
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<p>The Safety Forms are not open for submission. You may review the questions below, but teams cannot submit any information until May 1, <a href="https://2019.igem.org/Calendar">Opening Day.</a> Please email <i>safety [AT] igem [DOT] org</i> with any questions.</p>
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<div class="column full_size" style="text-align:center; margin:auto;"><h1> Safety Check In Form </h1> </div>
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<div class="column full_size"><h1 class="center_content"> Safety Check In Form </h1>  
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<h2>1. Check In Information </h2>  
 
<h2>1. Check In Information </h2>  
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<div>
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<div class="column half_size left_side">
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<h3 class="qnum">Choose an existing Check-In:</h3>
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<h3>A- Choose an existing Check-In:</h3>
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<select id="sub_form" data-form-field="sub_form">
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<br>
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<select class="hundred_percent" id="sub_form" data-form-field="sub_form">
 
<option selected id="new_sub_form_option" value="">(New...)</option>
 
<option selected id="new_sub_form_option" value="">(New...)</option>
 
<optgroup id="sub_forms_unsubmitted" label="In Progress"></optgroup>
 
<optgroup id="sub_forms_unsubmitted" label="In Progress"></optgroup>
 
<optgroup id="sub_forms_submitted" label="Submitted"></optgroup>
 
<optgroup id="sub_forms_submitted" label="Submitted"></optgroup>
 
</select>
 
</select>
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<div class="clear extra_space"></div>
 
</div>
 
</div>
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<div>
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<h3 class="qnum">Or, start a new Check-In:</h3>
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<div style="width: 48%; float: left;">
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<div class="column half_size right_side">
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<p class="question">This Check-In is for a:</p>
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<h3>B- Start a new Check-In:</h3>
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<ul>
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<li><label><input type="radio" name="Whole or Part" data-form-field="sub_form_whole_or_part" value="whole"> Whole Organism</label></li>
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<p class="question"> Check In name:
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<li><label><input type="radio" name="Whole or Part" data-form-field="sub_form_whole_or_part" value="part"> Part from an organism &rarr; <span class="question">Name of Part(s):</span></label> <input type="text" name="Name of Part(s)" data-validation="[value=part]" data-form-field="sub_form_part_name" size="40"></li>
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<input class="hundred_percent" type="text" name="check in name" data-form-field="sub_form_check_in_name">
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</ul>
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</p>
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</div>
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<div style="vertical-align: center; width: 48%; float: left;">
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<p class="question">Organism name:<br />(Include name of species, strain, and/or cell line.)</p>
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<p class="question_note">Please name your form to help identify what organism, part or activity you are checking in) If this Check-In is for a part: Enter its function. Please do not name it after either the organism that the part originally comes from, or the name of the chassis organism that you will put the part into.</p>
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<p><input type="text" data-form-field="sub_form_organism_name" size="40"></p>
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−
<p style="color: #777; font-style: italic;">(If this Check-In is for a part: Enter the name of the organism that the part originally comes from, not the name of the chassis organism that you will put the part into.)</p>
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</div>
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<div class="clear"></div>
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<p class="question">This Check-In is for a:</p>
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<p style="text-align: center;"><button type="button" id="start_new_sub_form">Start New Check-In</button></p>
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<ul>
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<li>
 +
<label>
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<input type="radio" name="check in for" data-form-field="sub_form_organism_part_activity" value="organism">  
 +
A. Whole Organism
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</label>
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</li>
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<li>
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<label>
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<input type="radio" name="check in for" data-form-field="sub_form_organism_part_activity" value="part">  
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B. Part
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</label>
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</li>
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<li>
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<label>
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<input type="radio" name="check in for" data-form-field="sub_form_organism_part_activity" value="activity">  
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C. Activity
 +
</label>
 +
</li>
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 +
 +
</ul>
 +
 
 +
<br><br>
 +
 
 +
<center>
 +
<button type="button" id="start_new_sub_form">Start New Check-In</button>
 +
</center>
 +
 
</div>
 
</div>
  
 
</fieldset>
 
</fieldset>
  
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<div class="clear"></div>
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<div id="private_contact_information">
 
<div id="private_contact_information">
  
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<p class="question">Name <input type="text" name="Team member Name" data-form-field="corr_team_member_name"></p>
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<p class="question">
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<p class="question">Email <input type="text" name="Team member Email" data-validate-as="email" class="validate-on-change" data-form-field="corr_team_member_email"></span></p>
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Name  
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<input class="forty_percent" type="text" name="Team member Name" data-form-field="corr_team_member_name">
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</p>
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<p class="question">
 +
Email  
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<input class="forty_percent" type="text" name="Team member Email" data-validate-as="email" class="validate-on-change" data-form-field="corr_team_member_email">
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</p>
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</div>
 
</div>
 
</fieldset>
 
</fieldset>
  
  
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<div class="clear extra_space"></div>
  
  
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<fieldset>
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<fieldset id="organism_information">
  
  
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<h2>3. Organism Information</h2>
 
  
 +
<h2>3.A Organism Information</h2>
  
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<!--------------------------------------------------------------------------------------------- Question 3.1 --------------------------------------------------------------------------------------------------------->
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<!--------------------------- Question 3.A.1 --------------------------->
  
  
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<p class="question">3.1 What Risk Group is this organism? <a target="_blank" href="https://2019.igem.org/Safety/Risk_Groups">[Help about Risk Groups]</a></p>
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<p class="question">3.A.1 What Risk Group is this organism?  
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<a href="https://2019.igem.org/Safety/Risk_Groups">[Help about Risk Groups]</a></p>
  
  
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<ul>
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<ul>
−
<li><label><input type="radio" name="1. a) Organism Risk Group" data-form-field="organism_risk_group" value="rg_1"> Risk Group 1</label></li>
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<li><label><input type="radio" name="1. a) Organism Risk Group" data-form-field="organism_risk_group" value="rg_2"> Risk Group 2</label></li>
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<li><label><input type="radio" name="1. a) Organism Risk Group" data-form-field="organism_risk_group" value="rg_3"> Risk Group 3</label></li>
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<li style="color: #a0a0a0;"><label><span class="wrapper"><input type="radio" disabled id="rg_4"></span> Risk Group 4</label></li>
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<li><label><input type="radio" name="1. a) Organism Risk Group" data-form-field="organism_risk_group" value="rg_not_applicable"> This organism is not a microbe. It does not have a Risk Group.</label></li>
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<li><label><input type="radio" name="1. a) Organism Risk Group" data-form-field="organism_risk_group" value="rg_other"> Other (please describe):</label> <textarea rows="2" name="Other Risk Group (describe)" data-form-field="rg_other_describe" data-validation="[value=rg_other]"></textarea></li>
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<li><label><input type="radio" name="1. a) Organism Risk Group" data-form-field="organism_risk_group" value="rg_unknown"> Unknown (please comment):</label> <textarea rows="2" name="Unknown Risk Group (comment)" data-form-field="rg_unknown_describe" data-validation="[value=rg_unknown]"></textarea></li>
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</ul>
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<li>
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<label>
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<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_1">
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Risk Group 1
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</label>
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</li>
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<li>
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<label>
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<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_2">
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Risk Group 2
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</label>
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</li>
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<li>
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<label>
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<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_3">
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Risk Group 3
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</label>
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</li>
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<li>
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<label>
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<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_4">
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Risk Group 4
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</label>
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</li>
  
 +
 +
<li>
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<label>
 +
<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_not_applicable">
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This organism is not a microbe. It does not have a Risk Group.
 +
</label>
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</li>
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 +
<li>
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<label>
 +
<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_other"> Other <span class="question_note">(please describe):</span>
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</label>
 +
<textarea rows="2" name="3.A.1 Other Risk Group - describe" data-form-field="rg_other_describe" data-validation="[value=rg_other]"> </textarea>
 +
</li>
 +
 +
 +
<li>
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<label>
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<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group" value="rg_unknown"> Unknown <span class="question_note">(please comment):</span>
 +
</label>
 +
<textarea rows="2" name="3.A.1 Unknown Risk Group - comment" data-form-field="rg_unknown_describe" data-validation="[value=rg_unknown]"></textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.A.1 Organism Risk Group" data-form-field="organism_risk_group"  value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
 +
</ul>
  
−
<p class="note">Note: iGEM teams should not use Risk Group 3 or 4 organisms, and they should not work in Safety Level 3 or 4 labs. If you are planning to work at Safety Level 3 or 4, contact safety (AT) igem (DOT) org right away!!</p>
 
  
  
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<div class="highlight post_item">
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<div class="details">
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<span class="icon alert"></span>
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<div class="title">Alert</div>
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</div>
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<p>iGEM teams should not use Risk Group 3 or 4 organisms, and they should not work in Safety Level 3 or 4 labs. If you are planning to work at Safety Level 3 or 4, contact safety (AT) igem (DOT) org right away!!</p>
  
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<!--------------------------------------------------------------------------------------------- Question 3.2 --------------------------------------------------------------------------------------------------------->
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<!--------------------------- Question 3.A.2 --------------------------->
  
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<p class="question">3.A.2 Is the organism on the
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<a href="https://australiagroup.net/en/human_animal_pathogens.html"> Australia Group List</a>, or on the
 +
<a href="https://www.selectagents.gov/SelectAgentsandToxinsList.html">U.S. Select Agents and Toxins List</a> or national equivalents?
 +
<br>
  
 +
<span class="question_note">If Yes, please email safety (at) igem (dot) org. These organisms and their parts are restricted for international shipment. See <a href="https://2019.igem.org/Safety/What_is_Safety#Shipment">Safe Shipment</a> for more information.</span></p>
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−
<p class="question">3.2 Is the organism on the <a href="https://australiagroup.net/en/human_animal_pathogens.html">Australia Group List</a>, or on the <a href="https://www.selectagents.gov/SelectAgentsandToxinsList.html">U.S. Select Agents and Toxins List</a>?</p>
+
<ul>
−
<p class="note">If Yes, please email safety (at) igem (dot) org. These organisms and their parts are restricted for international shipment. See <a href="https://2019.igem.org/Safety/What_is_Safety#Shipment">Safe Shipment</a> for more information.</p>
+
 +
<li>
 +
<label>
 +
<input type="radio" name="3.A.2 australia group" data-form-field="australia_group_yes_no" value="australia_group_yes">  
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Yes
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</label>
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</li>
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 +
<li>
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<label>
 +
<input type="radio" name="3.A.2 australia group" data-form-field="australia_group_yes_no" value="australia_group_no">  
 +
No
 +
</label>
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</li>
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.A.2 australia group" data-form-field="australia_group_yes_no"  value="autofill">
 +
N/A
 +
</label>
 +
</li>
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 +
</ul>
  
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<textarea rows="2" name="1. b) International Shipment Restrictions" data-form-field="on_restricted_lists"></textarea>
 
  
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<div class="clear extra_space"></div>
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<div class="line_divider soft"></div>
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<div class="clear extra_space"></div>
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<!--------------------------- Question 3.A.3 --------------------------->
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 +
 +
<p class="question">3.A.3 What risks have you identified from the use of this organism?
 +
</br>
 +
<span class="question_note">Please provide relevant links to supporting information, such culture collection data sheets</span>
 +
</p>
 +
 +
 +
<textarea rows="3" name="3.A.3 risks indentified" data-form-field="identified_risks"></textarea>
 +
 +
 +
 +
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
 +
<!--------------------------- Question 3.A.4 --------------------------->
 +
 +
 +
<p class="question">3.A.4 What measures have you put in place to manage the risks you have identified?</p>
 +
 +
<textarea rows="3" name="3.A.4 risks managed" data-form-field="managed_risks"></textarea>
 +
 +
 +
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
<!--------------------------- Question 3.A.5 --------------------------->
 +
 +
 +
<p class="question">3.A.5 How will you acquire this organism?</p>
 +
 +
<ul>
 +
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.A.5 how organism acquire" data-form-field="organism_how_acquire" value="institution">
 +
My institution <span class="question_note">(supervisor, another lab, central store, etc.)</span>
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.A.5 how organism acquire" data-form-field="organism_how_acquire" value="environmental_medium">
 +
Isolating from an environmental medium <span class="question_note">(e.g. soil, water)</span>
 +
</label>
 +
</li>
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.A.5 how organism acquire" data-form-field="organism_how_acquire" value="supply_source"> Ordered from a supply source <span class="question_note">(such as a culture collection, repository, or organism design company - please indicate which company) </span>
 +
</label>
 +
 +
<textarea rows="1" name="3.A.5 organism how acquire - describe" data-form-field="organism_how_acquire_describe" data-validation="[value=supply_source]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.A.5 how organism acquire" data-form-field="organism_how_acquire" value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
</ul>
 +
 +
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
<!--------------------------- Question 3.A.6 --------------------------->
 +
 +
 +
<p class="question">3.A.6 Further Comments
 +
<br>
 +
<span class="question_note">Anything else you want to tell us about this organism and how you will use it</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.A.6 further comments" data-form-field="organism_further_comments"></textarea>
  
  
 
</fieldset>
 
</fieldset>
 +
 +
 +
 +
 +
  
  
Line 310: Line 593:
  
  
−
<fieldset>
+
<fieldset id="part_information">
−
 
+
  
  
  
−
<h2> 4. Part Information </h2>  <span id="part_name_display"></span>
+
<h2> 3.B Part Information </h2>  <span id="part_name_display"></span>
  
 
<div id="part_information_fieldset_inner">
 
<div id="part_information_fieldset_inner">
  
  
 +
 +
<!--------------------------- Question 3.B.1 --------------------------->
  
−
<!--------------------------------------------------------------------------------------------- Question 4.1 --------------------------------------------------------------------------------------------------------->
+
 +
<p class="question">3.B.1 What is the parent organism for this part?</p>
 +
 +
<ul>
  
 +
 
 
−
<p class="question">4.1 What is the natural function of this part in its parent organism?</p>
+
<li>
−
<textarea rows="3" name="2. a) Natural Function of Part" data-form-field="part_natural_function" data-validation="[data-form-field=sub_form_whole_or_part][value=part]"></textarea>
+
<label>
 +
<input type="radio" name="3.B.1 parent organism" data-form-field="parent_organism" value="organism_parent_name"> Organism name<span class="question_note"> (please provide as much detail as possible)</span>
 +
</label>
 +
 +
<textarea rows="1" name="3.B.1 parent organism - describe" data-form-field="organism_parent_describe" data-validation="[value=organism_parent_name]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.1 parent organism" data-form-field="parent_organism" value="no_natural_comparator">  
 +
No natural comparator <span class="question_note">(including parts designed in silico) </span>
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.1 parent organism" data-form-field="parent_organism"  value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
</ul>
  
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
<!--------------------------- Question 3.B.2 --------------------------->
 +
 +
 +
<p class="question">3.B.2 What is the natural function of this part in its parent organism?
 +
<br>
 +
<span class="question_note">(If this is not a part taken from nature, please note this)</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.B.2 part function" data-form-field="parts_function"></textarea>
  
  
 
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−
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+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
 +
 +
<!--------------------------- Question 3.B.3 --------------------------->
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.2 --------------------------------------------------------------------------------------------------------->
 
  
 +
<p class="question">3.B.3 Is the part toxic to humans?
 +
</br>
 +
<span class="question_note">For example, a protein toxin such as Botox (Botulinum toxin), or if it is an enzyme that synthesizes a toxic small molecule.</span>
 +
</p>
 +
 +
 +
<ul>
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.3 toxic to humans" data-form-field="toxic_to_humans" value="toxic_to_humans_yes"> Yes <span class="question_note">(Please provide details) </span>
 +
</label>
 +
 +
<textarea rows="1" name="3.B.3 toxic to humans - describe" data-form-field="toxic_to_humans_describe" data-validation="[value=toxic_to_humans_yes]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.3 toxic to humans" data-form-field="toxic_to_humans" value="toxic_to_humans_no">
 +
No
 +
</label>
 +
</li>
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.3 toxic to humans" data-form-field="toxic_to_humans"  value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
</ul>
  
  
−
<p class="question">4.2 Is the part toxic to humans?</p>
 
−
<p class="note">For example, a protein toxin such as Botox (Botulinum toxin), or if it is an enzyme that synthesizes a toxic small molecule.</p>
 
−
<textarea rows="3" name="2. b) Is the Part a Toxin?" data-form-field="part_toxic" data-validation="[data-form-field=sub_form_whole_or_part][value=part]"></textarea>
 
  
  
 
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−
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+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
 +
 +
<!--------------------------- Question 3.B.4 --------------------------->
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.3 --------------------------------------------------------------------------------------------------------->
 
  
  
−
<p class="question">4.3 Is it a virulence factor, or does it mimic one? <a target="_blank" href="https://2019.igem.org/Safety/What_is_Safety#Lab_Work">[Help about Virulence Factors]</a></p>
+
 
−
<textarea rows="3" name="2. c) Is the Part a Virulence Factor?" data-form-field="part_virulence_factor" data-validation="[data-form-field=sub_form_whole_or_part][value=part]"></textarea>
+
<p class="question">3.B.4 Is the part a virulence factor, does it mimic one, or could it reasonably be expected to act as one in the chassis you are planning to use?  
 +
<a href="https://2019.igem.org/Safety/What_is_Safety#Lab_Work">[Help about Virulence Factors]</a></p>
 +
 +
 
 +
<ul>
 +
 
 
 
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.4 virulence factor" data-form-field="virulence_factor" value="virulence_factor_yes">
 +
Yes <span class="question_note">(Please provide details) </span>
 +
</label>
 +
 +
<textarea rows="1" name="3.B.3 virulence factor - describe" data-form-field="virulence_factor_describe" data-validation="[value=virulence_factor_yes]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.4 virulence factor" data-form-field="virulence_factor" value="virulence_factor_no">
 +
No
 +
</label>
 +
</li>
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.4 virulence factor" data-form-field="virulence_factor" value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
</ul>
 +
 
 
 
 
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
  
 +
<!--------------------------- Question 3.B.5 --------------------------->
  
−
<!--------------------------------------------------------------------------------------------- Question 4.4 --------------------------------------------------------------------------------------------------------->
 
  
  
−
<p class="question">4.4 Does the part, by itself, pose any safety risks? If Yes, what are the risks?</p>
+
<p class="question">3.B.5 Does the part, by itself, pose any risks to you, your colleagues, communities, or to the environment if it got out?
−
<textarea rows="3" name="2. d) Part Risks" data-form-field="part_risks" data-validation="[data-form-field=sub_form_whole_or_part][value=part]"></textarea>
+
</br>
 +
<span class="question_note">
 +
For example, a protein toxin that could affect indigenous plants or animals, or if it synthesizes a toxic small molecule, or encodes antimicrobial resistance.
 +
</span>
 +
</P>
 +
 
 +
<ul>
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.5 part risk for other" data-form-field="part_risk_for_others" value="part_risk_for_other_yes">
 +
Yes <span class="question_note">(Please provide details) </span>
 +
</label>
 +
 +
<textarea rows="2" name="3.B.5 part risk for other - describe" data-form-field="part_risk_for_others_describe" data-validation="[value=part_risk_for_other_yes]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.5 part risk for other" data-form-field="part_risk_for_others" value="part_risk_for_other_no">
 +
No
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.5 part risk for other" data-form-field="part_risk_for_others" value="autofill">  
 +
N/A
 +
</label>
 +
</li>
 +
</ul>
  
  
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.5 --------------------------------------------------------------------------------------------------------->
 
  
  
−
<p class="question">4.5 Does the part, when combined with other parts, pose any safety risks? If Yes, what are the risks? </p>
+
<!--------------------------- Question 3.B.6 --------------------------->
−
<textarea rows="3" name="2. d) Part Risks" data-form-field="part_risks_combined" data-validation="[data-form-field=sub_form_whole_or_part][value=part]"></textarea>
+
  
  
−
</div>
 
  
 +
<p class="question">3.B.6 Have you altered the part from its natural sequence, structure or function?</p>
 +
 +
 +
<ul>
 +
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.6 part altered" data-form-field="part_altered" value="part_altered_yes">
 +
Yes <span class="question_note">(Please provide details, included intended changes to structure or function) </span>
 +
</label>
 +
 +
<textarea rows="2" name="3.B.6 part_altered - describe" data-form-field="part_altered_describe" data-validation="[value=part_altered_yes]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.6 part altered" data-form-field="part_altered" value="part_altered_no">
 +
No
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.6 part altered" data-form-field="part_altered"  value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
</ul>
  
  
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.6 --------------------------------------------------------------------------------------------------------->
+
<!--------------------------- Question 3.B.7 --------------------------->
  
  
  
 +
<p class="question">3.B.7 Does the part, when combined with other parts or when used in your chassis, pose any risks to you, your colleagues, communities, or the environment if it got out? </p>
 +
  
−
<p class="question">4.6 What will you use this organism/part for?</p>
+
<ul>
−
<p class="note">How does it fit into the overall function of your project?</p>
+
  
−
<textarea rows="3" name="3. What will you use this organism/part for?" data-form-field="part_use"></textarea>
+
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.7 part combined cause risks" data-form-field="part_combined_cause_risks" value="part_combined_cause_risks_yes">
 +
Yes<span class="question_note"> (What are the risks? Please provide details)</span>
 +
</label>
 +
 +
<textarea rows="2" name="3.B.7 part combined cause risks - describe" data-form-field="part_combined_cause_risks_describe" data-validation="[value=part_combined_cause_risks_yes]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.7 part combined cause risks" data-form-field="part_combined_cause_risks" value="part_combined_cause_risks_no">
 +
No
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.7 part combined cause risks" data-form-field="part_combined_cause_risks" value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
 +
</ul>
 +
 
 +
 
 +
 
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
<!--------------------------- Question 3.B.8 --------------------------->
 +
 
 +
 
 +
<p class="question">3.B.8 In what chassis will you use this part?
 +
</br>
 +
<span class="question_note">(Please provide details of the organism or cell-free system in which this part will be used)</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.B.8 part used what chassis " data-form-field="part_used_what_chassis"></textarea>
  
  
Line 408: Line 901:
  
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
 +
 +
 +
 +
<!--------------------------- Question 3.B.9 --------------------------->
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.7 --------------------------------------------------------------------------------------------------------->
+
<p class="question">3.B.9 For what will you use this part?
 +
</br>
 +
<span class="question_note">How does it fit into the overall function of your project?</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.B.9 part what use " data-form-field="part_what_use"></textarea>
  
  
  
  
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
  
−
<p class="question">4.7 How will you acquire this organism/part?</p>
 
−
<p class="note">(e.g. from a culture collection, from another lab, isolating the part from the organism by PCR, ordering the part from a DNA synthesis company)</p>
 
  
−
<textarea rows="3" name="4. How will you acquire?" data-form-field="part_acquire"></textarea>
+
 
 +
<!--------------------------- Question 3.B.10 --------------------------->
 +
 
 +
 
 +
 
 +
<p class="question">3.B.10 How will you acquire this part?</p>
 +
 +
 
 +
<ul>
 +
 +
 
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.10 how acquire part" data-form-field="part_how_acquire" value="part_how_acquire_institution">
 +
My institution <span class="question_note">(supervisor, another lab, central store, etc.) </span>
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.10 how acquire part" data-form-field="part_how_acquire" value="part_how_acquire_isolating">
 +
Isolating from an organism <span class="question_note">(e.g. by PCR) </span>
 +
</label>
 +
</li>
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.10 how acquire part" data-form-field="part_how_acquire" value="part_how_synthesis_company"> Ordered from a gene synthesis company (if so, please indicate which company)
 +
</label>
 +
 +
<textarea rows="1" name="3.B.10 how acquire part synthetis company - describe" data-form-field="part_how_synthesis_company_describe" data-validation="[value=part_how_synthesis_company]"> </textarea>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.B.10 how acquire part" data-form-field="part_how_acquire" value="part_how_another_company"> Ordered from another company <span class="question_note">(such as a culture collection, repository, or organism design company - please indicate which company) </span>
 +
</label>
 +
 +
<textarea rows="1" name="3.B.10 how acquire part another company - describe" data-form-field="part_how_another_company_describe" data-validation="[value=part_how_another_company]"> </textarea>
 +
</li>
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.B.10 how acquire part" data-form-field="part_how_acquire" value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
 +
 +
</ul>
  
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.8 --------------------------------------------------------------------------------------------------------->
 
  
  
−
<p class="question">4.8 Are you taking any additional safety precautions when you use this organism/part?</p>
+
<!--------------------------- Question 3.B.11 --------------------------->
−
<p class="note">(e.g. handling it in a separate lab area, wearing additional protective equipment)</p>
+
  
−
<textarea rows="3" name="5. Additional safety precautions" data-form-field="additional_safety"></textarea>
+
 
 +
 
 +
<p class="question">3.B.11 What measures have you put in place to manage the risks you have identified in Q3.B.5 or Q3.B.7?
 +
</br>
 +
<span class="question_note">(e.g. handling it in a separate lab area, wearing additional protective equipment)</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.B.11 measures to manage risks" data-form-field="measures_manage_risks"></textarea>
  
  
  
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
  
  
−
<!--------------------------------------------------------------------------------------------- Question 4.9 --------------------------------------------------------------------------------------------------------->
 
  
 +
<!--------------------------- Question 3.B.12 --------------------------->
  
  
  
−
<p class="question">4.9 Further Comments</p>
+
<p class="question">3.B.12 Further Comments</br>
−
<p class="note">Anything else you want to tell us about this organism/part and how you will use it</p>
+
<span class="question_note">Anything else you want to tell us about this part and how you will use it</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.B.12 further comments" data-form-field="part_further_comments"></textarea>
  
−
<textarea rows="3" data-validation="optional" name="6. Further comments" data-form-field="further_comments"></textarea>
 
  
  
 +
</div>
  
 +
 +
</fieldset>
 +
 +
 +
 +
 +
 +
 +
<!-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 +
 +
ORGANISM INFORMATION
 +
 +
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->
 +
 +
 +
<fieldset id="activities">
 +
 +
<h2>3.C Activities</h2>
 +
 +
 +
 +
<!--------------------------- Question 3.C.1 --------------------------->
 +
 +
 +
 +
<p class="question">3.C.1 Which activity are you checking in?</p>
 +
 +
<ul>
 +
 +
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_genetic_marker">
 +
Experiments likely to bias the inheritance frequency of a genetic marker in an organism’s progeny, such as through the creation of a gene drive.
 +
</label>
 +
</li>
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_vaccine">
 +
Experiments likely to render a vaccine ineffective.
 +
</label>
 +
</li>
 +
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_resistance">
 +
Experiments likely to confer resistance to the World Health Organization's list of Critically Important Antimicrobials ⇗.
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_more_hazardous">
 +
Experiments likely to make hazardous biological agents more hazardous, such as enhancing the virulence or transmissibility of a human, plant, or animal pathogen, or altering its host-range. 
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_novel_hazardous">
 +
Experiments likely to result in a novel hazardous biological agent, such as by rendering a nonpathogen virulent, or conferring degradation of damaging important materials <span class="question_note">(such as electronics, plastics, etc.). </span>
 +
</label>
 +
</li>
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_avoid_detection">
 +
Experiments likely to enable a pathogen or organisms capable of damaging important materials to evade common diagnostic or detection tools.
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_experiments_weapon">
 +
Experiments likely to make a biological agent or toxin more suitable for use as a weapon.
 +
</label>
 +
</li>
 +
 +
 +
<li>
 +
<label>
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="activity_check_in_other">
 +
Another activity <span class="question_note">(please describe)</span>
 +
</label>
 +
 +
<textarea rows="1" name="3.C.1 activity check in - describe" data-form-field="activity_check_in_describe" data-validation="[value=activity_check_in_other]"> </textarea>
 +
 +
</li>
 +
 +
 +
<li>
 +
<label class="autofill_t">
 +
<input type="radio" name="3.C.1 activity check in" data-form-field="activity_check_in" value="autofill">
 +
N/A
 +
</label>
 +
</li>
 +
 +
 +
</ul>
 +
 +
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
−
<div class="line_divider"></div>
+
<div class="line_divider soft"></div>
 
<div class="clear extra_space"></div>
 
<div class="clear extra_space"></div>
 
 
  
 +
<!--------------------------- Question 3.C.2 --------------------------->
  
−
<!--------------------------------------------------------------------------------------------- Question 4.10 --------------------------------------------------------------------------------------------------------->
 
  
  
 +
<p class="question">3.C.2 Why do you want to carry out this activity?
 +
</br>
 +
<span class="question_note">What is your rationale for needing to do it?</span>
 +
</p>
 +
 +
<textarea rows="5" name="3.C.2 why activity" data-form-field="why_activity"></textarea>
  
 +
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
<!--------------------------- Question 3.C.3 --------------------------->
  
−
<p class="question">4.10 Comments about this form: Is it easy or difficult to use? Are the questions confusing?</p>
 
  
−
<textarea rows="2" data-validation="optional" name="7. Comments about this form" data-form-field="comments_about_this_form"></textarea>
 
  
 +
<p class="question">3.C.3 Please describe the planned protocol in as much detail as possible</p>
 +
<textarea rows="5" name="3.C.3 describe protocol" data-form-field="describe_protocol"></textarea>
  
 +
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
 +
<!--------------------------- Question 3.C.4 --------------------------->
 +
 +
 +
 +
<p class="question">3.C.4 What risks have you identified from this activity?</p>
 +
<textarea rows="5" name="3.C.4 identified risks" data-form-field="identified_risks_activity"></textarea>
 +
 +
 +
<div class="clear extra_space"></div>
 +
<div class="line_divider soft"></div>
 +
<div class="clear extra_space"></div>
 +
 +
 +
 +
<!--------------------------- Question 3.C.5 --------------------------->
 +
 +
 +
 +
<p class="question">3.C.5 What measures have you put in place to manage the risks you have identified?</p>
 +
<textarea rows="5" name="3.C.5 manage_risks" data-form-field="manage_risks_activity"></textarea>
 +
 +
 +
 
</fieldset>
 
</fieldset>
  
  
  
 +
 +
<!-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 +
 +
FURTHER COMMENTS
 +
 +
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->
 +
 +
 +
 +
 +
<fieldset>
 +
<h2> 4. Further Comments </h2>
 +
 +
 +
 +
<p class="question">Anything else you want to tell us about the organism, part or activity described on this form? Any more details about risks from your project and how you are managing them? Or any ideas how we might improve how we manage risks covered by this form?</p>
 +
<textarea rows="5" name="6. further_comments" data-form-field="general_further_comments"></textarea>
 +
 +
 +
</fieldset>
  
 
<!-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
<!-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Line 495: Line 1,236:
 
<h2> 6. Sign off </h2>
 
<h2> 6. Sign off </h2>
  
−
<div class="column third_size" style="text-align:center; margin:auto;">
+
<div class="column third_size">
−
<p class="question">Finished? <br><br>
+
<p class="question center_content">Finished?  
 +
<br><br>
 +
<input type="submit" data-form-field="submit" value="SUBMIT">
 +
</p>
 +
</div>
 +
 
  
−
<input type="submit" data-form-field="submit" value="SUBMIT"></p>
+
<div class="column third_size">
 +
<p class="question center_content">Need to make changes?
 +
<br><br>
 +
<input type="submit" data-form-field="return_form" value="UNSUBMIT">
 +
</p>
 
</div>
 
</div>
−
<div class="column third_size" style="text-align:center; margin:auto;">
 
−
<p class="question">Need to make changes? <br> <br>
 
  
−
<input type="submit" data-form-field="return_form" value="UNSUBMIT"></p>
+
 
−
</div>
+
<div class="column third_size">
−
<div class="column third_size" style="text-align:center; margin:auto;">
+
<p class="question center_content">Want to erase this Check-In?  
−
<p class="question">Want to erase this Check-In? <br><br>
+
<br><br>
−
<input type="submit" data-form-field="delete_form" value="DELETE"></p>
+
<input type="submit" data-form-field="delete_form" value="DELETE">
 +
</p>
 
</div>
 
</div>
  
 
</div>
 
</div>
 
</fieldset>
 
</fieldset>
 +
 +
 +
 +
 +
 
</html>{{HTML/Temp/FormsAdmin}}<html>
 
</html>{{HTML/Temp/FormsAdmin}}<html>
  
 
</div>
 
</div>
−
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+
<!----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 +
end of formbody  
 +
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------->
 +
 
  
 
</div>  
 
</div>  
Line 546: Line 1,303:
  
 
<div class="column quarter_size">
 
<div class="column quarter_size">
−
<img src="https://static.igem.org/mediawiki/2019/c/c2/Safety_submitted.svg" height="120px">
+
<img src="https://static.igem.org/mediawiki/2019/c/c2/Safety_submitted.svg" height="80px">
 
</div>
 
</div>
  
Line 559: Line 1,316:
  
 
<script type="text/javascript">
 
<script type="text/javascript">
 +
 
$("#start_new_sub_form").click(function(event) {
 
$("#start_new_sub_form").click(function(event) {
−
var orgname = $("[data-form-field='sub_form_organism_name']").val();
+
−
var wholeorpart = $("[data-form-field='sub_form_whole_or_part']:checked").val();
+
var check_in_name = $("[data-form-field='sub_form_check_in_name']").val();
−
var partname = (wholeorpart == "whole") ? "[Whole Organism]" : $("[data-form-field='sub_form_part_name']").val();
+
−
if (orgname == "" || typeof wholeorpart == "undefined" || partname == "") {
+
 +
var organism_part_activity = $("[data-form-field='sub_form_organism_part_activity']:checked").val();
 +
 +
if (check_in_name == "" || typeof organism_part_activity == "undefined" ) {
 
alert("Please complete all the fields to start a new Check-In.");
 
alert("Please complete all the fields to start a new Check-In.");
 
}
 
}
 +
 
else {
 
else {
−
var value = orgname + " / " + partname;
+
var value = check_in_name;
 
$("[data-form-field=sub_form]").trigger("kforms:newsubform", [value]);
 
$("[data-form-field=sub_form]").trigger("kforms:newsubform", [value]);
 
}
 
}
 +
 
});
 
});
 +
  
 +
 +
 
function custom_one_input_changed_response(input_element, command, effective_date, data, textStatus, jqxhr) {
 
function custom_one_input_changed_response(input_element, command, effective_date, data, textStatus, jqxhr) {
 +
 +
var autofill_text= "Autofill text, team selected other type of check in."
 +
 +
 
if (input_element.get(0) == $("[data-form-field=sub_form]").get(0)) {
 
if (input_element.get(0) == $("[data-form-field=sub_form]").get(0)) {
−
$("#organism_name_display").text( $("[data-form-field='sub_form_organism_name']").val() );
+
−
var wholeorpart = $("[data-form-field='sub_form_whole_or_part']:checked").val();
+
var organism_part_activity = $("[data-form-field='sub_form_organism_part_activity']:checked").val();
−
if (wholeorpart == "whole") {
+
−
$("#part_name_display").text("[Whole Organism]");
+
$(":radio[value=autofill]").hide();
−
$("#part_information_fieldset_inner").slideUp();
+
 +
if (organism_part_activity == "organism") {
 +
 +
$("#organism_information").show();
 +
 +
$('#part_information').find("textarea").val(autofill_text);
 +
$('#part_information').find("input[type='radio']").val(['autofill']);
 +
$("#part_information").hide();
 +
 +
$("#activities").find("textarea").val(autofill_text);
 +
$("#activities").find("input[type='radio']").val(['autofill']);
 +
$("#activities").hide();
 +
 
 
}
 
}
−
else {
+
 
−
$("#part_name_display").text( $("[data-form-field='sub_form_part_name']").val() );
+
−
$("#part_information_fieldset_inner").slideDown();
+
if (organism_part_activity == "part") {
 +
$("#part_information").show();
 +
 +
$('#organism_information').find("textarea").val(autofill_text);
 +
$('#organism_information').find("input[type='radio']").val(['autofill']);
 +
$("#organism_information").hide();
 +
 
 +
$("#activities").find("textarea").val(autofill_text);
 +
$("#activities").find("input[type='radio']").val(['autofill']);
 +
$("#activities").hide();
 
}
 
}
 +
 +
 +
if (organism_part_activity == "activity") {
 +
$("#activities").show();
 +
 +
$('#organism_information').find("textarea").val(autofill_text);
 +
$('#organism_information').find("input[type='radio']").val(['autofill']);
 +
$("#organism_information").hide();
 +
 +
$('#part_information').find("textarea").val(autofill_text);
 +
$('#part_information').find("input[type='radio']").val(['autofill']);
 +
$("#part_information").hide();
 +
}
 +
 
 
 
}
 
}
 
}
 
}
 +
 +
// var remove_organism = null;
 +
// var remove_part = null;
 +
// var remove_activities = null;
 +
 +
// remove_organism = $("#organism_information").detach();
 +
// remove_part = $("#part_information").detach();
 +
// remove_activities = $("#activities").detach();
 +
 +
 +
// $("#organism_RA").html(remove_organism);
 +
// $("#part_information_RA").html(remove_part);
 +
// $("#activities_RA").html(remove_activities);
 +
 +
 
</script>
 
</script>

Latest revision as of 15:49, 14 May 2020

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Safety Check-Ins

You should submit a Check-In before you acquire or use certain materials in your lab or before you undertake certain types of activities. Specifically, you should send us a Check-In for any organism, part, or activity that is not on the White List. We expect to reply to most Check-Ins within a few days. If you have not heard back from us in a week, please email safety [at] igem.org.

Check-Ins are a way for you to quickly and easily ask iGEM's safety experts to review your plans for safely acquiring and using a higher risk organism/part/activity, and to approve your plans or suggest changes.

We encourage STUDENTS, instead of instructors, to complete this form. Please provide as much detail as possible.

Once the iGEM Safety and Security Committee has approved your Check-In by email, you may begin working with the material (organism or part) or activity. You may Check-In for as many organisms/parts as you wish, and any team member may send a Check-In at any time until the Jamboree.

Note

While you type, this form will remember your answers. When you are finished, press the "Submit" button at the bottom to send your form to the iGEM Safety Committee.
If you need help, or if you are unsure whether an organism/part requires a Check-In, email safety (at) igem (dot) org to ask.

Frequently Asked Questions about Check-Ins

What if I am unsure whether my organism/part requires a Check-In?

Ask us! Email safety AT igem DOT org to ask questions about what requires a Check-In. Or, because the Check-In form is short and easy, you can submit a Check-In even if you are unsure whether it is necessary.


We want to do a little preliminary work with an organism/part, but we might not use it for our final project. Do we still have to Check-In before we acquire the organism/part?

Yes! Please Check-In for every organism/part you want to acquire that is not on the White List, even if you will not use it in your final project. You can tell us in the "Further Comments" section that it is not for your final project, or that you are unsure. We have made the Check-In form short and easy, so you can Check-In for many parts, even ones you are not sure about using.


Uh-oh! We misunderstood the White List, and we already started working with an organism/part that requires a Check-In. What do we do?

Just let us know. Email safety AT igem DOT org to describe the situation, and send us a Check-In promptly. Tell us in the "Further Comments" section what you have done with the organism/part already.


We are going to use a lot of parts. May we combine them on a single Check-In?

If the parts all come from the same parent organism, you may combine them on a single Check-In, but make sure you give complete information about each part. If the parts come from different parent organisms, please send separate Check-Ins.


You approved our Check-In for an organism/part. Do we still need to ask our university/institution about it? What about checking local laws?

Yes! The iGEM Safety Committee does not replace institutional review boards, or your local government. You are responsible for obtaining from your university or government any approvals that might be necessary. Your university or government might have different rules about what organisms/parts require special approval.


We are only using organisms/parts from the White List, and therefore we do not need to submit any Check-Ins. Do we still need to ask our university/institution about our project? What about checking local laws?

Yes! Again, the iGEM Safety Committee does not replace institutional review boards, or your local government. Even if you are only using organisms/parts that are generally considered "safe", you still have the responsibility to follow good laboratory procedures. Also, you are responsible for ensuring that your project complies with the rules of your university/institution, and with the laws of your nation.

Opening Day

The Safety Forms are not open for submission. You may review the questions below, but teams cannot submit any information until May 1, Opening Day. Please email safety [AT] igem [DOT] org with any questions.

Safety Check In Form

Team Selection

Please choose a team

1. Check In Information

A- Choose an existing Check-In:


B- Start a new Check-In:

Check In name:

Please name your form to help identify what organism, part or activity you are checking in) If this Check-In is for a part: Enter its function. Please do not name it after either the organism that the part originally comes from, or the name of the chassis organism that you will put the part into.

This Check-In is for a:



2. Contact Information

Name

Email

3.A Organism Information

3.A.1 What Risk Group is this organism? [Help about Risk Groups]

Alert

iGEM teams should not use Risk Group 3 or 4 organisms, and they should not work in Safety Level 3 or 4 labs. If you are planning to work at Safety Level 3 or 4, contact safety (AT) igem (DOT) org right away!!

3.A.2 Is the organism on the Australia Group List, or on the U.S. Select Agents and Toxins List or national equivalents?
If Yes, please email safety (at) igem (dot) org. These organisms and their parts are restricted for international shipment. See Safe Shipment for more information.

3.A.3 What risks have you identified from the use of this organism?
Please provide relevant links to supporting information, such culture collection data sheets

3.A.4 What measures have you put in place to manage the risks you have identified?

3.A.5 How will you acquire this organism?

3.A.6 Further Comments
Anything else you want to tell us about this organism and how you will use it

3.B Part Information

3.B.1 What is the parent organism for this part?

3.B.2 What is the natural function of this part in its parent organism?
(If this is not a part taken from nature, please note this)

3.B.3 Is the part toxic to humans?
For example, a protein toxin such as Botox (Botulinum toxin), or if it is an enzyme that synthesizes a toxic small molecule.

3.B.4 Is the part a virulence factor, does it mimic one, or could it reasonably be expected to act as one in the chassis you are planning to use? [Help about Virulence Factors]

3.B.5 Does the part, by itself, pose any risks to you, your colleagues, communities, or to the environment if it got out?
For example, a protein toxin that could affect indigenous plants or animals, or if it synthesizes a toxic small molecule, or encodes antimicrobial resistance.

3.B.6 Have you altered the part from its natural sequence, structure or function?

3.B.7 Does the part, when combined with other parts or when used in your chassis, pose any risks to you, your colleagues, communities, or the environment if it got out?

3.B.8 In what chassis will you use this part?
(Please provide details of the organism or cell-free system in which this part will be used)

3.B.9 For what will you use this part?
How does it fit into the overall function of your project?

3.B.10 How will you acquire this part?

3.B.11 What measures have you put in place to manage the risks you have identified in Q3.B.5 or Q3.B.7?
(e.g. handling it in a separate lab area, wearing additional protective equipment)

3.B.12 Further Comments
Anything else you want to tell us about this part and how you will use it

3.C Activities

3.C.1 Which activity are you checking in?

3.C.2 Why do you want to carry out this activity?
What is your rationale for needing to do it?

3.C.3 Please describe the planned protocol in as much detail as possible

3.C.4 What risks have you identified from this activity?

3.C.5 What measures have you put in place to manage the risks you have identified?

4. Further Comments

Anything else you want to tell us about the organism, part or activity described on this form? Any more details about risks from your project and how you are managing them? Or any ideas how we might improve how we manage risks covered by this form?

6. Sign off

Finished?

Need to make changes?

Want to erase this Check-In?

Template:HTML/Temp/FormsAdmin

This form has been submitted

You can unsubmit the form if you wish to make further edits.