Difference between revisions of "Team:USTC-Software/Public Engagement"

 
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          <h1 class="text-center">Human Practice</h1>
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          <h3>Earlier Stage</h3>
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          <h4>Visit to Huaheng Biotech</h4>
+
          <div class="passage">Huaheng Biotech is a company which the leading position around the world, in the field of
+
            alanine products producing using methods of microbiological fermentation. They had put a major capital
+
            investment in research and development. After communicating with their research leader, we took a visit to
+
            their plant and had a meetup with their researchers. <br>
+
            <div class="text-center psgImg">
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              <img src="https://static.igem.org/mediawiki/2019/e/e0/T--USTC-Software--hp1.jpg" alt="">
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            </div>
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            Despite their high level of research, they said that there remained no good pre-analytical way to decide how
+
            to improve their process of production. The existing way and tools had too many limits to be used by
+
            researchers so that they could only experiment with changes thought out of experience. Also, with careful
+
            consideration of environmental protection, they kept on finding ways to improve their products while not
+
            impact productive rates. <br>
+
  
          </div>
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  <div id="autoMenu2" class="autoMenu2"></div>
          <h4>Meeting with Prof. Jiong Hong</h4>
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<div class="container">
          <div class="passage">
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    <div class="row">
            After acknowledging the problems faced in the real world, we went to have a meeting with our PI, professor
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            Jiong Hong. Prof. Hong informed us about the existence of Flux Balance Analysis and further researches based
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            on it. Then we had some investigation about FBA, only to find that all existing tools to do FBA lack the
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      <!--    </div>-->
            ease of use despite the beauty of its method. It first came into our mind to build a great FBA tool that
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      <div class="col-lg-12 col-md-12">
            meets the requirements of real production environments.
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        <div class="card page-content" style="background: rgba(255, 255, 255, 0.6);">
            <br>
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          <div class="card-body">
             <div class="text-center psgImg">
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             <h1 class="text-center">Public Engagement And Education</h1>
              <img src="https://static.igem.org/mediawiki/2019/3/36/T--USTC-Software--hp_hongjiong.jpg" alt="">
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            <h3>Overview</h3>
 +
            <div class="passage">
 +
              To include more people in participating in work in synthetic biology and promote both iGEM and us in the
 +
              local community,
 +
              we made efforts in education, propaganda, and a board game.
 
             </div>
 
             </div>
          </div>
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            <h3>Public Engagement</h3>
          <h4>Preliminary product design</h4>
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            <h4>USTC-interesting Synthetic Transaction and Cooperation</h4>
          <div class="passage">
+
            <div class="passage">
            We proposed a revolutionary workflow that would greatly improve efficiency and decrease the complexity of
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              In order to promote public awareness of synthetic biology and introduce its basic ideas to the laymen,
            using. In other words, we designed a high-level framework to automatically solve many inner logics and thus
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              our team is devoted to the development of a board game which aims at instructing non-biologists to
            simplify the process of analysis.
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              understand
            <br>
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              what biobricks can do and how can we use them to make new things.
            <div class="text-center psgImg">
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              <br><br>
              <img src="https://static.igem.org/mediawiki/2019/b/b2/T--USTC-Software--downside1.png" alt="">
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              As games have become a significant part of our spare time, and most youngsters would rather play games to
 +
              have fun.
 +
              We consider it a perfect opportunity to introduce synthetic biology to them.
 +
              <br><br>
 +
              To attract more people without such background to be interested in this area, we develop this board game
 +
              specially
 +
              designed for synthetic biology. In this game, even laymen can have fun. We greatly weakened the hardcore
 +
              and
 +
              annoying part of synthetic biology when we keep the main idea of it.
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/c/ca/T--USTC-Software--public_card_game.jpg" alt="">
 +
                <p>Card Game</p>
 +
              </div>
 +
              <br>
 +
              Still want to know more? <a href="https://static.igem.org/mediawiki/2019/d/dc/T--USTC-Software--game_instruction.pdf">Click Here</a>.
 +
            </div>
 +
            <h4>USTC1958 Café</h4>
 +
            <div class="passage">
 +
              In our broader community, there's a café called USTC1958, which is the highest rating café in Hefei,
 +
              according to the internet. We consider it a great way to interact with them. They may add color to our
 +
              project while we can add new elements for them.
 +
              <br><br>
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/6/6b/T--USTC-Software--public_cafe0.jpg" alt="">
 +
                <p>USTC1958 Cafe</p>
 +
              </div>
 +
              Talking with the café owner, she spoke highly of our projects and enthusiasm, and also showed great
 +
              interest in
 +
              synthetic biology. As an attractive café owner, she provided brilliant suggestions for our team name,
 +
              logo, and
 +
              uniform. Since we don't have a teammate in the art relating majors, their advice had a great influence on
 +
              us.
 +
              <br><br>
 +
              Meanwhile, we gave an overview of synthetic biology to them. They were interested in it and willing to add
 +
              some
 +
              "synthetic" elements in the café. We offered to rendered our board game, which may help the customer kill
 +
              time
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              and subtly teach them some aspects of synthetic biology. Thus we can make complex scientific information
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              flow into the community.
 +
              <br><br>
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/2/2d/T--USTC-Software--public_cafe.png" alt="">
 +
                <p>Having a chat in the cafe</p>
 +
              </div>
 +
              It's really marvelous that more and more people will start learning with games and coffee.
 
             </div>
 
             </div>
            <br>
 
            <div class="text-center psgImg">
 
  
               <img src="https://static.igem.org/mediawiki/2019/4/49/T--USTC-Software--downside2.png" alt="">
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            <h3>Education</h3>
 +
            <h4>Video for kids</h4>
 +
            <div class="passage">
 +
               At the very beginning of our project, we came up with an idea of making a promotional video for the
 +
              children and teenagers.
 +
              Considering they may not know much about synthetic biology or even biology, we made our video
 +
              uncomplicated and cute,
 +
              only want to encourage them to step in and explore by themselves. We believe it's the best way to appeal
 +
              to an amateur.
 +
              <br><br>
 +
              <div class="psgImg">
 +
                <video width="760" height="480" controls="" __idm_id__="787084289">
 +
                  <source src="https://static.igem.org/mediawiki/2019/f/ff/T--USTC-Software--educational_video.mp4" type="video/mp4">
 +
                </video>
 +
              </div>
 +
              <br><br>
 +
              Teenagers, especially kids, love cartoons. Through our fascinating video, the children not only gained
 +
              happiness but
 +
              also increased their biological knowledge.
 +
              We contacted the Bureau of Education of Yongji County, Jilin City, Jilin Province, hoping that we could
 +
              play our
 +
              video in a primary school. They are pleased with our idea and speak highly of our popular science work.
 +
              Then our video was permitted to be played in all of the schools there. The influence was beyond our
 +
              expectation,
 +
              and the pupils and junior students were indeed stimulated by the marvel world of synthetic biology.
 +
              <br><br>
 +
<div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/5/51/T--USTC-Software--public_lesson2.jpg" alt="">
 +
                <p>Land on class</p>
 +
              </div>
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/b/b0/T--USTC-Software--public_video1.jpg" alt="">
 +
                <p>Concentrating in the class</p>
 +
              </div>
 +
              How do we say that? The teachers there mailed us, retelling several questions; for example, in the first
 +
              edition of our video,
 +
              we simply implant the "Fragrant Gene" and complete the workflow, which is inaccurate. Some students were
 +
              confused if that's
 +
              all we need to perform synthesis. We then replied, answering the question, and modified our video. We
 +
              regard such positive
 +
              feedback as our success in the effort of education towards the youngers.
 +
<br>
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/1/19/T--USTC-Software--public_video2.jpg" alt="">
 +
                <p>Watching the iGEM videos</p>
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              </div>
 +
              <br>
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/2/25/T--USTC-Software--public_video3.jpg" alt="" style="max-height: 700px">
 +
                <p>Propaganda biology</p>
 +
              </div>
 
             </div>
 
             </div>
             We first considered to support a wild and customized searching function based on the optimization of
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             <h4>Lecture for teenagers</h4>
            databases. After a job done by UESTC-Software in 2018, we wanted to do some upgrade of the scale of
+
            <div class="passage">
            databases.
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              Besides this, we also planned to promote synthetic biology to high school students.
            <br>
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              For sure, the video we made seems too simple to them, so we decided to present them a lecture, namely, a
            Then we visited Wenfei Yu, the leader of team USTC in 2018, and got acknowledged about some common databases
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              lesson.
            used in Syn-Biology and their shortcomings. Also, we became aware of cobrapy, a tool that offers several
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              Back to his alma mater, our biology team leader Suyang Zhong gave his junior students a speech about
            APIs to do FBA.
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              biology and synthetic biology.
            <br>
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              <br><br>
            To help us, USTC 2019 team gave us a hand, which enabled us to be instantly familiar with cobra. <br>
+
              <div class="psgImg">
            <div class="text-center psgImg">
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                <img src="https://static.igem.org/mediawiki/2019/5/51/T--USTC-Software--public_lesson2.jpg" alt="">
              <img src="https://static.igem.org/mediawiki/2019/3/34/T--USTC-Software--hp_cobra.jpg" alt="">
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                <p>Land on class</p>
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              </div>
 +
              According to the biology teacher, current students prefer to spend more time studying math or physics.
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              Though they are indeed the basis of biology,
 +
              it's also true that they are more likely to choose other majors after going to college.
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              <br><br>
 +
              In the lecture, we first introduced the fantastic biology world. Then we elaborated on what is synthetic
 +
              biology about and what is iGEM Foundation.
 +
              Of course, we propaganda our team and our project. They listened carefully, seemed that we had Ignited
 +
              their passion for biology. And we sincerely
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              hope these potential students can join us, becoming the future generation of iGEMers.
 +
              <div class="psgImg">
 +
                <img src="https://static.igem.org/mediawiki/2019/d/d6/T--USTC-Software--public_meeting.jpg" alt="">
 +
                <p>Lesson</p>
 +
              </div>
 
             </div>
 
             </div>
          </div>
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            <h4>Meeting</h4>
          <h3>Mid-term: A Change of Emphasis</h3>
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            <div class="passage">
          <h4>Meetup with SYSU 2019 team</h4>
+
              Our university has made significant achievements in physics and math, and we have plenty of undergraduates
          <div class="passage">
+
              majoring in them. However,
            We went to Guangzhou in July and visited the iGEM team of Sun Yat-sen University. In the meetup, we
+
              we found our mates knew little about synthetic biology and iGEM. Therefore, Team USTC and we held a
            introduced our projects to each other. At that time, we devoted ourselves to optimize our database which was
+
              meeting in our university to
            at a great scale and then linking the output to FBA’s input. However, our idea hadn’t been fully approved by
+
              popularize synthetic biology and present our projects to the entire school, trying to absorb new force.
            the SYSU team and their professor. They put forward that out idea about optimizing massive databases was not
+
              <br><br>
            targeted for Synthetic Biology. In other words, there was a bias in our aim, for the work done to optimize
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            the databases will distract us to design FBA workflow and its efficiency.
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            <br>
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            In the emergency meeting that night we all admitted that the problem did exist. Then we decided immediately
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            a change of emphasis of our project, which would more concentrated on the optimization of FBA and the whole
+
            framework.
+
  
          </div>
+
              <div class="psgImg">
          <h4>Discussion with upperclassmen</h4>
+
                <img src="https://static.igem.org/mediawiki/2019/6/6e/T--USTC-Software--public_lesson.jpg" alt="">
          <div class="passage">
+
                <p>Meeting</p>
            He helped us tease out our whole project and his clear thinking impressed us very much. He then raised a
+
              </div>
            question that whether we can provide a recommendation of Biobricks when we end up giving graphs of analysis.
+
              In our meeting room, students, namely, our potential iGEMers from all kinds of majors, listened carefully.
            For example, if modifications and analysis had been done to the user's model based on E. coli, the
+
              We told them what is synthetic biology in detail, like how a synthetic biologist works, and what we have
            researcher can immediately be acknowledged by our system which Biobricks he or she can use. After more
+
              acquired during this year's project.
            discussion, we found it would be a pretty useful function. So we decided to append our system with a micro
+
              They are deeply fascinated by the world of synthetic biology that we described. During our Q&amp;A time, they
            recommendation system for proper Biobricks. <br>
+
              asked many questions and were eager
            <div class="text-center psgImg">
+
              to know what do they need to join us. We were surprised by their enthusiasm, and it seems that we
              <img src="https://static.igem.org/mediawiki/2019/4/42/T--USTC-Software--hp_upperclassman.jpg" alt="">
+
              successfully intrigued more people participating in synthetic biology.
 
             </div>
 
             </div>
          </div>
+
            <h3>Conclusion</h3>
          <h3>CCIC: Weighing and Cooperating</h3>
+
            <div class="passage">
          <div class="passage">
+
              By presenting lectures at schools and introducing our project into the broader community, we are sure such
            CCic, which stands for the Conference of China iGEMer Community, is the biggest synthetic biology conference
+
              activities can help promote synthetic biology and iGEM. We interacted with many schools and successfully
            in China. This year we had a wonderful time there in Shenzhen. We did presentations and our idea was
+
              promoted mutual learning and engagement. We also thought seriously about the difference between elementary
            evaluated by many experts and lovers in the field of synthetic biology. There we were encouraged to expand
+
              students and undergraduates, using different methods to promote synthetic biology instead of using only
            our project to a platform, using which users can share their models, and see the history of modifying. It
+
              one type of propaganda. Meanwhile, we made some efforts to collaborate with our broader community. We
            enriched our project, made it closer to a mature one.
+
              talked with a popular café and introduced our project. Then we designed a syn-bio relating board game and
            <br>
+
              rendered them for their customers. No one can say no to coffee and games, and so do someone may love
            <div class="psgImg text-center">
+
              biology. We're sure such activities can enable more people to contribute and participate in synthetic
               <img src="https://static.igem.org/mediawiki/2019/8/8a/T--USTC-Software--hp_meetinccic.jpg" alt="">
+
               biology. Our works are bitter like coffee, but the rewards are pleasant like board games.
 
             </div>
 
             </div>
          </div>
 
          <h4>Communication with Tongji 2019</h4>
 
          <div class="passage">
 
            After our presentation, teammates of Tongji 2019 found us and asked whether we can offer some more specific
 
            suggestions, for their project was related to increasing generation rate of products of fermentation.
 
            After knowing that we can only analyze changes of major metabolites’ flux, they were quite disappointed. We
 
            talked to the professors and some senior students there at CCIC and they approved our design. For "it is not
 
            unnecessary for a researcher who does flux analysis to do this job, for it should be considered during
 
            experimental design. Your analysis of flux major metabolites is much more useful in a generative perspective
 
            and considering the accuracy."
 
          </div>
 
          <h4>Cooperating with UESTC-Software</h4>
 
          <div class="passage">
 
            During the communication with UESTC-Software 2019, we came up with the idea to build our recommendation
 
            system base on their well-handled data, for they had done a great job in collecting data and optimizing
 
            databases. We then reached cooperation with each other and the first time opened up collaboration lying
 
            deeply in the projects of iGEM Software Teams.
 
          </div>
 
          <h3>The Test Run</h3>
 
          <h4>With USTC 2019</h4>
 
          <div class="passage">
 
            Team USTC has always been enthusiastic to help us test our tool and improve our project. We had done several
 
            tests together, during which some small functions, such as optimizations with the display of graphs in the
 
            output, comparisions between different but alike models and polishing UI of the interface, were added in.
 
          </div>
 
          <h4>With SJTU-Software 2019</h4>
 
          <div class="passage">
 
            unfinished yet
 
          </div>
 
          <h2 class="ref">References</h2>
 
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              <li>1. https://www.ncbi.nlm.nih.gov</li>
 
              <li>2. https://2018.igem.org/Team:UESTC-Software/Description</li>
 
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Latest revision as of 02:38, 22 October 2019

Public Engagement And Education

Overview

To include more people in participating in work in synthetic biology and promote both iGEM and us in the local community, we made efforts in education, propaganda, and a board game.

Public Engagement

USTC-interesting Synthetic Transaction and Cooperation

In order to promote public awareness of synthetic biology and introduce its basic ideas to the laymen, our team is devoted to the development of a board game which aims at instructing non-biologists to understand what biobricks can do and how can we use them to make new things.

As games have become a significant part of our spare time, and most youngsters would rather play games to have fun. We consider it a perfect opportunity to introduce synthetic biology to them.

To attract more people without such background to be interested in this area, we develop this board game specially designed for synthetic biology. In this game, even laymen can have fun. We greatly weakened the hardcore and annoying part of synthetic biology when we keep the main idea of it.

Card Game


Still want to know more? Click Here.

USTC1958 Café

In our broader community, there's a café called USTC1958, which is the highest rating café in Hefei, according to the internet. We consider it a great way to interact with them. They may add color to our project while we can add new elements for them.

USTC1958 Cafe

Talking with the café owner, she spoke highly of our projects and enthusiasm, and also showed great interest in synthetic biology. As an attractive café owner, she provided brilliant suggestions for our team name, logo, and uniform. Since we don't have a teammate in the art relating majors, their advice had a great influence on us.

Meanwhile, we gave an overview of synthetic biology to them. They were interested in it and willing to add some "synthetic" elements in the café. We offered to rendered our board game, which may help the customer kill time and subtly teach them some aspects of synthetic biology. Thus we can make complex scientific information flow into the community.

Having a chat in the cafe

It's really marvelous that more and more people will start learning with games and coffee.

Education

Video for kids

At the very beginning of our project, we came up with an idea of making a promotional video for the children and teenagers. Considering they may not know much about synthetic biology or even biology, we made our video uncomplicated and cute, only want to encourage them to step in and explore by themselves. We believe it's the best way to appeal to an amateur.



Teenagers, especially kids, love cartoons. Through our fascinating video, the children not only gained happiness but also increased their biological knowledge. We contacted the Bureau of Education of Yongji County, Jilin City, Jilin Province, hoping that we could play our video in a primary school. They are pleased with our idea and speak highly of our popular science work. Then our video was permitted to be played in all of the schools there. The influence was beyond our expectation, and the pupils and junior students were indeed stimulated by the marvel world of synthetic biology.

Land on class

Concentrating in the class

How do we say that? The teachers there mailed us, retelling several questions; for example, in the first edition of our video, we simply implant the "Fragrant Gene" and complete the workflow, which is inaccurate. Some students were confused if that's all we need to perform synthesis. We then replied, answering the question, and modified our video. We regard such positive feedback as our success in the effort of education towards the youngers.

Watching the iGEM videos


Propaganda biology

Lecture for teenagers

Besides this, we also planned to promote synthetic biology to high school students. For sure, the video we made seems too simple to them, so we decided to present them a lecture, namely, a lesson. Back to his alma mater, our biology team leader Suyang Zhong gave his junior students a speech about biology and synthetic biology.

Land on class

According to the biology teacher, current students prefer to spend more time studying math or physics. Though they are indeed the basis of biology, it's also true that they are more likely to choose other majors after going to college.

In the lecture, we first introduced the fantastic biology world. Then we elaborated on what is synthetic biology about and what is iGEM Foundation. Of course, we propaganda our team and our project. They listened carefully, seemed that we had Ignited their passion for biology. And we sincerely hope these potential students can join us, becoming the future generation of iGEMers.

Lesson

Meeting

Our university has made significant achievements in physics and math, and we have plenty of undergraduates majoring in them. However, we found our mates knew little about synthetic biology and iGEM. Therefore, Team USTC and we held a meeting in our university to popularize synthetic biology and present our projects to the entire school, trying to absorb new force.

Meeting

In our meeting room, students, namely, our potential iGEMers from all kinds of majors, listened carefully. We told them what is synthetic biology in detail, like how a synthetic biologist works, and what we have acquired during this year's project. They are deeply fascinated by the world of synthetic biology that we described. During our Q&A time, they asked many questions and were eager to know what do they need to join us. We were surprised by their enthusiasm, and it seems that we successfully intrigued more people participating in synthetic biology.

Conclusion

By presenting lectures at schools and introducing our project into the broader community, we are sure such activities can help promote synthetic biology and iGEM. We interacted with many schools and successfully promoted mutual learning and engagement. We also thought seriously about the difference between elementary students and undergraduates, using different methods to promote synthetic biology instead of using only one type of propaganda. Meanwhile, we made some efforts to collaborate with our broader community. We talked with a popular café and introduced our project. Then we designed a syn-bio relating board game and rendered them for their customers. No one can say no to coffee and games, and so do someone may love biology. We're sure such activities can enable more people to contribute and participate in synthetic biology. Our works are bitter like coffee, but the rewards are pleasant like board games.