Template:SEU/toolJS
var DNAspace=9;//| | | | var DNAwid=18; var DNAstep=3; var arrowLen=6; var arrowHeadLen=12; var DNAseperate=36; var Font="0px Arial"; var FontDescription="20px Arial"; var fontSpace=3; var Black=[0,0,0]; var reacArrowLen=60; var reacArrowHeadLen=9; var longDNAlen=40; var shortDNAlen=32; var arrowSin=0.4; var arrowCos=Math.sqrt(1-arrowSin*arrowSin); var line45Angle=Math.asin(arrowSin); var arrowAngle=line45Angle*0.7; var longDNAlen=30; var shortDNAlen=15; var fontSpaceRatio=2; //color and name //name var d="d"; var xp="x+",xn="x-"; var y="y",yn="y-"; var waste="waste"; var wi0p=[],wi0n=[]; var wip=[],win=[]; var inputp=[],inputn=[]; var inputpBkp=[],inputnBkp=[]; //color var dColor=[]; var xpColor=[]; var xnColor=[]; var yColor=[]; var ynColor=[]; var wasteColor=[0,0,0]; var inputpColor=[],inputnColor=[]; var inputpBkpColor=[],inputnBkpColor=[]; var wi0pColor=[],wi0nColor=[]; var wipColor=[],winColor=[]; var state=0;//part of reaction to print var seqDict=[[]]; var lis=[]; var seqFile=[]; var weightNum=1;
function draw() {
weightNum=document.getElementById("number").value;
if (weightNum>8) {
alreadySubmit.innerHTML="Too many inputs for a single neuron!";
}
else{
//alreadySubmit.innerHTML="Generating a neuron with "+weightNum+" inputs...
";
seqDict=[[]];
seqFile=[];
drawNeuron(weightNum);
alreadySubmit.innerHTML="Successfully generated a neuron with "+weightNum+" inputs!
Click the three buttons below to see reactions corresponding to each step!
";
}
}
function setCanvans(height){
var canv = document.getElementById("words");
canv.innerHTML="<canvas id=\"canvas\" width=\"1700\" height=\""+height+"\"></canvas>
"
}
function showSeq(){
var seqs = document.getElementById("sequence");
seqs.innerHTML="";
for(var i=0;i<lis.length;i++){
seqs.innerHTML=seqs.innerHTML+lis[i]+"
";
}
}
function windowSeq(){
var content="";
for(var i=0;i<seqFile.length;i++){
content+=seqFile[i];
}
var eleLink = document.createElement('a');
eleLink.download = "sequence.txt"; eleLink.style.display = 'none'; // 字符内容转变成blob地址 var blob = new Blob([content]); eleLink.href = URL.createObjectURL(blob); // 触发点击 document.body.appendChild(eleLink); eleLink.click(); // 然后移除 document.body.removeChild(eleLink);
}
function clearCanvas(){ var c=document.getElementById('canvas'); var ctx=c.getContext('2d'); ctx. c=document.getElementById('seqCanvas'); ctx=c.getContext('2d'); ctx.clearRect(0,0,c.width,c.height); // var t=document.getElementById('sequence'); // t.innerHTML=""; lis=[]; } function arrowReac(ctx,len,arrowReacLen,[x,y]){ ctx.strokeStyle='rgb('+Black[0]+','+Black[0]+','+Black[0]+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x+len,y); ctx.moveTo(x+len-arrowReacLen,y+arrowReacLen); ctx.lineTo(x+len,y); ctx.moveTo(x+len-arrowReacLen,y-arrowReacLen); ctx.lineTo(x+len,y); ctx.stroke(); } function revArrowReac(ctx,len,arrowReacLen,[x,y]){ ctx.strokeStyle='rgb('+Black[0]+','+Black[0]+','+Black[0]+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x+len,y); ctx.moveTo(x+len-arrowReacLen,y+arrowReacLen); ctx.lineTo(x+len,y); ctx.moveTo(x+len-arrowReacLen,y-arrowReacLen); ctx.lineTo(x+len,y); ctx.moveTo(x+arrowReacLen,y+arrowReacLen); ctx.lineTo(x,y); ctx.moveTo(x+arrowReacLen,y-arrowReacLen); ctx.lineTo(x,y); ctx.stroke(); } function horizontalLine(ctx,name,len,[x,y],[R,G,B]){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x+len,y); ctx.stroke(); ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x,y-fontSpace); }
function verticalLine(ctx,len,[x,y],[R,G,B]){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x,y+len); ctx.stroke(); }
function horizontalDashedLine(ctx,name,len,[x,y],[R,G,B],step){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); for(var i=0;i<=len-1;i+=2*step){ ctx.moveTo(x+i,y); ctx.lineTo(x+i+step,y); ctx.stroke(); } ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x,y-fontSpace); }
function up45RightLine(ctx,name,len,[x,y],[R,G,B]){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x+arrowCos*len,y-arrowSin*len); ctx.stroke(); ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+len/2,y-fontSpace); }
function up45DashedRightLine(ctx,name,len,[x,y],[R,G,B],step){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); for(var i=0;i<=len-1;i+=2*step){ ctx.moveTo(x+arrowCos*i,y-arrowSin*i); ctx.lineTo(x+arrowCos*(i+step),y-arrowSin*(i+step)); ctx.stroke(); } ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+len/2,y-fontSpace); }
function up45LeftLine(ctx,name,len,[x,y],[R,G,B]){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x-arrowCos*len,y-arrowSin*len); ctx.stroke(); ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x-len/2,y-len/2-fontSpace); }
function up45DashedLeftLine(ctx,len,[x,y],[R,G,B],step){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); for(var i=0;i<=len-1;i+=2*step){ ctx.moveTo(x-arrowCos*i,y-arrowSin*i); ctx.lineTo(x-arrowCos*(i+step),y-arrowSin*(i+step)); ctx.stroke(); } }
function down45LeftLine(ctx,len,[x,y],[R,G,B]){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x-arrowCos*len,y+arrowSin*len); ctx.stroke(); }
function down45DashedLeftLine(ctx,len,[x,y],[R,G,B],step){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); for(var i=0;i<=len-1;i+=2*step){ ctx.moveTo(x-arrowCos*i,y+arrowSin*i); ctx.lineTo(x-arrowCos*(i+step),y+arrowSin*(i+step)); ctx.stroke(); } }
function arrowHorizontalRight(ctx,name,len,[x,y],[R,G,B],arrowLen,arrowAngle){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); ctx.lineTo(x+len,y); //right ctx.moveTo(x+len-Math.floor(arrowLen*Math.cos(arrowAngle)), y-Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x+len,y); //left ctx.moveTo(x+len-Math.floor(arrowLen*Math.cos(arrowAngle)), y+Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x+len,y); ctx.stroke(); ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+len/2,y-fontSpace); }
function arrowHorizontalLeft(ctx,name,len,[x,y],[R,G,B],arrowLen,arrowAngle){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); //right ctx.moveTo(x+Math.floor(arrowLen*Math.cos(arrowAngle)), y-Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x+len,y); //left ctx.moveTo(x+Math.floor(arrowLen*Math.cos(arrowAngle)), y+Math.floor(arrowLen*Math.sin(arrowAngle)));
ctx.lineTo(x+len,y); ctx.moveTo(x,y); ctx.lineTo(x+len,y);
ctx.stroke();
ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+len/2,y-fontSpace); }
function arrowDashedHorizontalRight(ctx,name,len,[x,y],[R,G,B],arrowLen,arrowAngle,step){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); ctx.moveTo(x,y); for(var i=0;i<=len-1;i+=2*step){ ctx.moveTo(x+i,y); ctx.lineTo(x+i+step,y); ctx.stroke(); } //right ctx.moveTo(x+len-Math.floor(arrowLen*Math.cos(arrowAngle)), y-Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x+len,y); //left ctx.moveTo(x+len-Math.floor(arrowLen*Math.cos(arrowAngle)), y+Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x+len,y); ctx.stroke(); ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+len/2,y-fontSpace); }
function arrowDashedHorizontalLeft(ctx,name,len,[x,y],[R,G,B],arrowLen,arrowAngle,step){ ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); //right ctx.moveTo(x+Math.floor(arrowLen*Math.cos(arrowAngle)), y-Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x,y); //left ctx.moveTo(x+Math.floor(arrowLen*Math.cos(arrowAngle)), y+Math.floor(arrowLen*Math.sin(arrowAngle))); ctx.lineTo(x,y); ctx.moveTo(x,y); for(var i=0;i<=len-1;i+=2*step){ ctx.moveTo(x+i,y); ctx.lineTo(x+i+step,y); ctx.stroke(); } ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+len/2,y-fontSpace); }
// function arrowUpRight45(ctx,lenInAxis,[x,y],[R,G,B],arrowLen,arrowAngle){//arrowAngle:theta,best:Math.PI/8 // ctx.strokeStyle='rgb('+R+','+G+','+B+')'; // ctx.beginPath(); // ctx.moveTo(x,y); // ctx.lineTo(x+arrowCos*lenInAxis,y-arrowSin*lenInAxis); // //right // ctx.moveTo(x+arrowCos*lenInAxis-Math.floor(arrowLen*Math.cos(Math.PI/2-arrowAngle)), // y-arrowSin*lenInAxis+Math.floor(arrowLen*Math.sin(Math.PI/2-arrowAngle))); // ctx.lineTo(x+arrowCos*lenInAxis,y-arrowSin*lenInAxis); // //left // ctx.moveTo(x+arrowCos*lenInAxis-Math.floor(arrowLen*Math.sin(Math.PI/2-arrowAngle)), // y-arrowSin*lenInAxis+Math.floor(arrowLen*Math.cos(Math.PI/2-arrowAngle))); // ctx.lineTo(x+arrowCos*lenInAxis,y-arrowSin*lenInAxis); // ctx.stroke(); // }
function arrowDashedUpRight45(ctx,name,lenInAxis,[x,y],[R,G,B],arrowLen,arrowAngle,stepInAxis){//arrowAngle:theta ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); for(var i=0;i<=lenInAxis-1;i+=2*stepInAxis){ ctx.moveTo(x+arrowCos*i,y-arrowSin*i); ctx.lineTo(x+arrowCos*(i+stepInAxis),y-arrowSin*(i+stepInAxis)); ctx.stroke(); } //right half arrow head ctx.moveTo(x+arrowCos*lenInAxis-Math.floor(arrowLen*Math.cos(arrowAngle-line45Angle)), y-arrowSin*lenInAxis+Math.floor(arrowLen*Math.sin(line45Angle-arrowAngle))); ctx.lineTo(x+arrowCos*lenInAxis,y-arrowSin*lenInAxis); //left half arrow head ctx.moveTo(x+arrowCos*lenInAxis-Math.floor(arrowLen*Math.sin(Math.PI/2-line45Angle-arrowAngle)), y-arrowSin*lenInAxis+Math.floor(arrowLen*Math.cos(Math.PI/2-line45Angle-arrowAngle))); ctx.lineTo(x+arrowCos*lenInAxis,y-arrowSin*lenInAxis); ctx.stroke(); ctx.font = Font; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(name,x+lenInAxis/2,y-fontSpace); }
// function arrowDownLeft45(ctx,lenInAxis,[x,y],[R,G,B],arrowLen,arrowAngle){//arrowAngle:theta,best:Math.PI/8 // ctx.strokeStyle='rgb('+R+','+G+','+B+')'; // ctx.beginPath(); // ctx.moveTo(x,y); // ctx.lineTo(x-arrowCos*lenInAxis,y+arrowSin*lenInAxis); // //right // ctx.moveTo(x-arrowCos*lenInAxis+Math.floor(arrowLen*Math.cos(Math.PI/2-arrowAngle)), // y+arrowSin*lenInAxis-Math.floor(arrowLen*Math.sin(Math.PI/2-arrowAngle))); // ctx.lineTo(x-arrowCos*lenInAxis,y+arrowSin*lenInAxis); // //left // ctx.moveTo(x-arrowCos*lenInAxis+Math.floor(arrowLen*Math.sin(Math.PI/2-arrowAngle)), // y+arrowSin*lenInAxis-Math.floor(arrowLen*Math.cos(Math.PI/2-arrowAngle))); // ctx.lineTo(x-arrowCos*lenInAxis,y+arrowSin*lenInAxis); // ctx.stroke(); // }
function arrowDashedDownLeft45(ctx,name,lenInAxis,[x,y],[R,G,B],arrowLen,arrowAngle,stepInAxis){//arrowAngle:theta ctx.strokeStyle='rgb('+R+','+G+','+B+')'; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.beginPath(); for(var i=0;i<=lenInAxis-1;i+=2*stepInAxis){ ctx.moveTo(x-arrowCos*i,y+arrowSin*i); ctx.lineTo(x-arrowCos*(i+stepInAxis),y+arrowSin*(i+stepInAxis)); ctx.stroke(); } //right ctx.moveTo(x-arrowCos*lenInAxis+Math.floor(arrowLen*Math.cos(line45Angle-arrowAngle)), y+arrowSin*lenInAxis-Math.floor(arrowLen*Math.sin(line45Angle-arrowAngle))); ctx.lineTo(x-arrowCos*lenInAxis,y+arrowSin*lenInAxis); //left half arrow head ctx.moveTo(x-arrowCos*lenInAxis+Math.floor(arrowLen*Math.sin(Math.PI/2-line45Angle-arrowAngle)), y+arrowSin*lenInAxis-Math.floor(arrowLen*Math.cos(Math.PI/2-line45Angle-arrowAngle))); ctx.lineTo(x-arrowCos*lenInAxis,y+arrowSin*lenInAxis); ctx.stroke();
ctx.font = Font; ctx.fillText(name,x-lenInAxis/2,y+lenInAxis/2+fontSpace); }
function drawDoubleDNAnoArrow(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){
horizontalLine(ctx,DNAname,DNAlen,[posX,posY],[R,G,B]);
for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){
verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]);
}
horizontalLine(ctx,' ',DNAlen,[posX,posY+DNAwid],[R,G,B]);
}
function drawDoubleDNAwithArrowHorizontalRight(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ arrowHorizontalRight(ctx,DNAname,DNAlen,[posX,posY],[R,G,B],arrowHeadLen,arrowAngle); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } horizontalLine(ctx,' ',DNAlen,[posX,posY+DNAwid],[R,G,B]); }
function drawDoubleDNAwithArrowHorizontalLeft(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ horizontalLine(ctx,DNAname,DNAlen,[posX,posY+DNAwid],[R,G,B]); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } arrowHorizontalLeft(ctx,' ',DNAlen,[posX,posY-DNAwid],[R,G,B],arrowHeadLen,arrowAngle); }
function drawDoubleDNAwithArrow45(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ horizontalLine(ctx,DNAlen,[posX,posY],[R,G,B]); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } horizontalLine(ctx,DNAlen,[posX,posY+DNAwid],[R,G,B]); arrow45(ctx,arrowLen,[posX+DNAlen,posY],[R,G,B],arrowHeadLen,arrowAngle); }
function drawDoubleDNADashednoArrow(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ horizontalDashedLine(ctx,DNAname,DNAlen,[posX,posY],[R,G,B],DNAstep); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } horizontalDashedLine(ctx,' ',DNAlen,[posX,posY+DNAwid],[R,G,B],DNAstep); }
function drawDoubleDNADashedwithArrowHorizontalRight(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ arrowDashedHorizontalRight(ctx,DNAname,DNAlen,[posX,posY],[R,G,B],arrowHeadLen,arrowAngle,DNAstep); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } horizontalDashedLine(ctx,' ',DNAlen,[posX,posY+DNAwid],[R,G,B],DNAstep); }
function drawDoubleDNADashedwithArrowHorizontalLeft(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ horizontalDashedLine(ctx,DNAname,DNAlen,[posX,posY],[R,G,B],DNAstep); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } arrowDashedHorizontalLeft(ctx,' ',DNAlen,[posX,posY+DNAwid],[R,G,B],arrowHeadLen,arrowAngle,DNAstep); }
function drawDoubleDNADashedwithArrow45(ctx,DNAname,DNAlen,[R,G,B],[posX,posY]){ horizontalDashedLine(ctx,DNAlen,[posX,posY],[R,G,B],DNAstep); for(var i=DNAspace/2;i<=DNAlen;i+=DNAspace){ verticalLine(ctx,DNAwid,[posX+i,posY],[R,G,B]); } horizontalDashedLine(ctx,DNAlen,[posX,posY+DNAwid],[R,G,B],DNAstep); arrow45(ctx,arrowLen,[posX+DNAlen,posY],[R,G,B],arrowHeadLen,arrowAngle); }
function showSpeciesName(ctx,str,[X,Y],sep=DNAseperate){//use before showing a species
Y+=DNAseperate;
X+=sep;
displayStr(ctx,str,[X,Y],Black);
}
//According to Fig. 11
function drawMul(ctx,aName,bName,cName,aColor,bColor,cColor,[X0,Y0],longDNAlen,shortDNAlen){//c=a*b
//rectangular
var maxX=0,maxY=0;
//exponential factor
var Black=[0,0,0];
var X=X0;
var Y=Y0;
var Da="D"+aName;
var al=aName+"l";
var a=aName;
var ar=aName+"r";
var Db="D"+bName;
var bl=bName+"l";
var b=bName;
var br=bName+"r";
var Dc="D"+cName;
var cl=cName+"l";
var c=cName;
var cr=cName+"r";
displayStr(ctx,'input',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen);
displayStr(ctx,'output',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,cName,[X,Y]); X=drawSig(ctx,cName,cColor,[X,Y],longDNAlen,shortDNAlen); Y0=Y0+4*DNAseperate; Y=Y0; X=X0; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); //Wi showSpeciesName(ctx,"Wi",[X,Y],DNAseperate/2); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]);
X=X+shortDNAlen+DNAseperate*2; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
//waste X=X+reacArrowLen+DNAseperate*2; showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]); //waste X=X+shortDNAlen+DNAseperate; showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2); horizontalLine(ctx,a,longDNAlen,[X,Y],aColor); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,ar,shortDNAlen,[X,Y],aColor,arrowLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; //Multiplication //Line 1 X=X0; Y=Y0+4*DNAseperate; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); //Li showSpeciesName(ctx,"Li",[X,Y]); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+arrowCos*longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+arrowCos*shortDNAlen; Y=Y-arrowSin*shortDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+arrowCos*shortDNAlen; Y=Y-arrowSin*shortDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+4*DNAseperate; revArrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate; //Hi showSpeciesName(ctx,"Hi",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; horizontalDashedLine(ctx,bl+"*",shortDNAlen,[X,Y+DNAwid],bColor,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+arrowCos*shortDNAlen; Y=Y-arrowSin*shortDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+arrowCos*shortDNAlen; Y=Y-arrowSin*shortDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black);
X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep); //Bi X=X+DNAseperate; Y=Y0+4*DNAseperate; showSpeciesName(ctx,"Bi",[X,Y]); horizontalLine(ctx,a,longDNAlen,[X,Y],aColor); X=X+longDNAlen; horizontalDashedLine(ctx,ar,shortDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; arrowDashedHorizontalRight(ctx,bl,shortDNAlen,[X,Y],bColor,arrowHeadLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; //Line 2 X=X0; Y=Y0+8*DNAseperate; showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); //Hi showSpeciesName(ctx,"Hi",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; horizontalDashedLine(ctx,bl+"*",shortDNAlen,[X,Y+DNAwid],bColor,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+arrowCos*shortDNAlen; Y=Y-arrowSin*shortDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+arrowCos*shortDNAlen; Y=Y-arrowSin*shortDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+8*DNAseperate; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate;
//waste showSpeciesName(ctx,"waste",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; up45LeftLine(ctx,Db,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,bl,shortDNAlen,bColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,br,shortDNAlen,bColor,[X,Y]);
X=X+shortDNAlen+DNAseperate;
//Oi showSpeciesName(ctx,"Oi",[X,Y]); horizontalLine(ctx,b,longDNAlen,[X,Y],bColor); X=X+longDNAlen; horizontalDashedLine(ctx,br,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; //Line 3 X=X0; Y=Y0+12*DNAseperate; //Oi showSpeciesName(ctx,"Oi",[X,Y]); horizontalLine(ctx,b,longDNAlen,[X,Y],bColor); X=X+longDNAlen; horizontalDashedLine(ctx,br,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+DNAseperate; //Ti showSpeciesName(ctx,"Ti",[X,Y]); arrowDashedDownLeft45(ctx,br+"*",shortDNAlen,[X,Y+DNAwid],bColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,Da,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,al,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,a,longDNAlen,[X,Y],aColor); arrowDashedUpRight45(ctx,ar,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,Db,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,b,longDNAlen,[X,Y],bColor); arrowDashedUpRight45(ctx,br,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],bColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,Dc,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,cl,shortDNAlen,cColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,c,longDNAlen,[X,Y],cColor); arrowDashedUpRight45(ctx,cr,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],cColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]); //waste X=X+reacArrowLen+2*DNAseperate; showSpeciesName(ctx,"waste",[X,Y]); up45LeftLine(ctx,b,longDNAlen,[X,Y],bColor); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,br,shortDNAlen,bColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Da,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,al,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Db,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Dc,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,cl,shortDNAlen,cColor,[X,Y]);
X=X+shortDNAlen+DNAseperate; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,cName,[X,Y]); X=drawSig(ctx,cName,cColor,[X,Y],longDNAlen,shortDNAlen);
Y0-=4*DNAseperate; if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; maxX+=2*DNAseperate; maxY=Y+2*DNAseperate; ctx.strokeStyle='rgb('+0+','+0+','+0+')'; ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(X0-DNAseperate,maxY); ctx.moveTo(maxX,maxY); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(maxX,maxY); ctx.lineTo(X0-DNAseperate,maxY); ctx.stroke(); displayStr(ctx,"multiplication",[X0-DNAseperate,Y0-DNAseperate-fontSpace],Black); return Y; }
//ReLU weighted summation function drawMulReLU(ctx,aName,bName,cName,dName,aColor,bColor,cColor,dColor,[X0,Y0],longDNAlen,shortDNAlen){//c=a*b //rectangular var maxX=0,maxY=0; //exponential factor var X=X0; var Y=Y0; var Da="D"+aName; var al=aName+"l"; var a=aName; var ar=aName+"r"; var Db="D"+bName; var bl=bName+"l"; var b=bName; var br=bName+"r"; var Dc="D"+cName; var cl=cName+"l"; var c=cName; var cr=dName+"r"; var Dd="D"+dName; var dl=dName+"l"; var d=dName; var dr=dName+"r";
displayStr(ctx,'input',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); displayStr(ctx,'output',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,cName,[X,Y]); X=drawSig(ctx,cName,cColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,dName,[X,Y]); X=drawSig(ctx,dName,dColor,[X,Y],longDNAlen,shortDNAlen); Y0=Y0+4*DNAseperate; Y=Y0; X=X0; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); //Wi showSpeciesName(ctx,"Wi",[X,Y],DNAseperate/2); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]);
X=X+shortDNAlen+DNAseperate*2; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]); //waste X=X+reacArrowLen+DNAseperate*2; showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]); //waste X=X+shortDNAlen+DNAseperate; showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2); horizontalLine(ctx,a,longDNAlen,[X,Y],aColor); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,ar,shortDNAlen,[X,Y],aColor,arrowLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; //Multiplication //Line 1 X=X0; Y=Y0+4*DNAseperate;
showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); //Li showSpeciesName(ctx,"Li",[X,Y]); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,cl,shortDNAlen,[X,Y],cColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Dd,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,dl,shortDNAlen,[X,Y],dColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+4*DNAseperate; revArrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate; //Hi showSpeciesName(ctx,"Hi",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; horizontalDashedLine(ctx,bl+"*",shortDNAlen,[X,Y+DNAwid],bColor,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,cl,shortDNAlen,[X,Y],cColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Dd,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,dl,shortDNAlen,[X,Y],dColor,arrowHeadLen,arrowAngle,DNAstep); //Bi X=X+arrowCos*shortDNAlen+DNAseperate; Y=Y0+4*DNAseperate; showSpeciesName(ctx,"Bi",[X,Y]); horizontalLine(ctx,a,longDNAlen,[X,Y],aColor); X=X+longDNAlen; horizontalDashedLine(ctx,ar,shortDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; arrowDashedHorizontalRight(ctx,bl,shortDNAlen,[X,Y],bColor,arrowHeadLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; //Line 2 X=X0; Y=Y0+8*DNAseperate; showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); //Hi showSpeciesName(ctx,"Hi",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; horizontalDashedLine(ctx,bl+"*",shortDNAlen,[X,Y+DNAwid],bColor,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45DashedRightLine(ctx,cl,shortDNAlen,[X,Y],cColor,DNAstep); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; up45RightLine(ctx,Dd,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,dl,shortDNAlen,[X,Y],dColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+8*DNAseperate; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate; //waste showSpeciesName(ctx,"waste",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; up45LeftLine(ctx,Db,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,bl,shortDNAlen,bColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,br,shortDNAlen,bColor,[X,Y]);
X=X+shortDNAlen+DNAseperate;
//Oi showSpeciesName(ctx,"Oi",[X,Y]); horizontalLine(ctx,b,longDNAlen,[X,Y],bColor); X=X+longDNAlen; horizontalDashedLine(ctx,br,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,cl,shortDNAlen,[X,Y],cColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dd,longDNAlen,[X,Y],Black); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,dl,shortDNAlen,[X,Y],dColor,arrowHeadLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; //Line 3 X=X0; Y=Y0+12*DNAseperate; //Oi showSpeciesName(ctx,"Oi",[X,Y]); horizontalLine(ctx,b,longDNAlen,[X,Y],bColor); X=X+longDNAlen; horizontalDashedLine(ctx,br,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Da,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,al,shortDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,bl,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,cl,shortDNAlen,[X,Y],cColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dd,longDNAlen,[X,Y],Black); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,dl,shortDNAlen,[X,Y],dColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+DNAseperate;
//Ti
showSpeciesName(ctx,"Ti",[X,Y]);
arrowDashedDownLeft45(ctx,br+"*",shortDNAlen,[X,Y+DNAwid],bColor,arrowHeadLen,arrowAngle,DNAstep);
drawDoubleDNAnoArrow(ctx,Da,longDNAlen,Black,[X,Y]);
X=X+longDNAlen;
drawDoubleDNADashednoArrow(ctx,al,shortDNAlen,aColor,[X,Y]);
X=X+shortDNAlen;
up45RightLine(ctx,a,longDNAlen,[X,Y],aColor);
arrowDashedUpRight45(ctx,ar,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],aColor,arrowHeadLen,arrowAngle,DNAstep);
drawDoubleDNAnoArrow(ctx,Db,longDNAlen,Black,[X,Y]);
X=X+longDNAlen;
drawDoubleDNADashednoArrow(ctx,bl,shortDNAlen,bColor,[X,Y]);
X=X+shortDNAlen;
up45RightLine(ctx,b,longDNAlen,[X,Y],bColor);
arrowDashedUpRight45(ctx,br,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],bColor,arrowHeadLen,arrowAngle,DNAstep);
drawDoubleDNAnoArrow(ctx,Dc,longDNAlen,Black,[X,Y]);
X=X+longDNAlen;
drawDoubleDNADashednoArrow(ctx,cl,shortDNAlen,cColor,[X,Y]);
X=X+shortDNAlen;
up45RightLine(ctx,c,longDNAlen,[X,Y],cColor);
arrowDashedUpRight45(ctx,cr,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],cColor,arrowHeadLen,arrowAngle,DNAstep);
drawDoubleDNAnoArrow(ctx,Dd,longDNAlen,Black,[X,Y]);
X=X+longDNAlen;
drawDoubleDNADashednoArrow(ctx,dl,shortDNAlen,dColor,[X,Y]);
X=X+shortDNAlen;
up45RightLine(ctx,d,longDNAlen,[X,Y],dColor);
arrowDashedUpRight45(ctx,dr,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],dColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+12*DNAseperate; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate;
//waste showSpeciesName(ctx,"waste",[X,Y]); up45LeftLine(ctx,b,longDNAlen,[X,Y],bColor); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,br,shortDNAlen,bColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Da,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,al,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Db,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Dc,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,cl,shortDNAlen,cColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Dd,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,dl,shortDNAlen,dColor,[X,Y]);
X=X+shortDNAlen+DNAseperate; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,cName,[X,Y]); X=drawSig(ctx,cName,cColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,dName,[X,Y]); X=drawSig(ctx,dName,dColor,[X,Y],longDNAlen,shortDNAlen);
Y0-=4*DNAseperate; if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; maxX+=2*DNAseperate; maxY=Y+2*DNAseperate; ctx.strokeStyle='rgb('+0+','+0+','+0+')'; ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(X0-DNAseperate,maxY); ctx.moveTo(maxX,maxY); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(maxX,maxY); ctx.lineTo(X0-DNAseperate,maxY); ctx.stroke(); displayStr(ctx,"multiplication",[X0-DNAseperate,Y0-DNAseperate-fontSpace],Black);
return Y; } //according to Fig. 9 function drawAdd(ctx,aName,bName,aColor,bColor,[X0,Y0],longDNAlen,shortDNAlen){//a->b //rectangular var maxX=0,maxY=0; //addition X=X0; Y=Y0; var Da="D"+aName; var al=aName+"l"; var a=aName; var ar=aName+"r"; var Db="D"+bName; var bl=bName+"l"; var b=bName; var br=bName+"r";
displayStr(ctx,'input',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); displayStr(ctx,'output',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); Y0=Y0+4*DNAseperate; Y=Y0; X=X0; //Line 1 showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); //Gi showSpeciesName(ctx,"Gi",[X,Y],DNAseperate/2); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Db,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,bl,shortDNAlen,[X,Y],bColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+shortDNAlen+DNAseperate*2; Y=Y0; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate;
//Oi
Y=Y0;
showSpeciesName(ctx,"Oi",[X,Y]);
horizontalLine(ctx,a,longDNAlen,[X,Y],aColor);
X=X+longDNAlen;
horizontalDashedLine(ctx,ar,shortDNAlen,[X,Y],aColor,DNAstep);
X=X+shortDNAlen;
horizontalLine(ctx,Db,longDNAlen,[X,Y],Black);
X=X+longDNAlen;
arrowDashedHorizontalRight(ctx,bl,shortDNAlen,[X,Y],bColor,arrowHeadLen,arrowAngle,DNAstep);
//waste
X=X+shortDNAlen+DNAseperate*2;
showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2);
up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black);
drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep);
X=X+shortDNAlen;
drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]);
X=X+longDNAlen;
drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]);
if(X+shortDNAlen>maxX) maxX=X+shortDNAlen;
//Line 2
X=X0;
Y=Y0+4*DNAseperate;
//Oi
showSpeciesName(ctx,"Oi",[X,Y]);
horizontalLine(ctx,a,longDNAlen,[X,Y],aColor);
X=X+longDNAlen;
horizontalDashedLine(ctx,ar,shortDNAlen,[X,Y],aColor,DNAstep);
X=X+shortDNAlen;
horizontalLine(ctx,Db,longDNAlen,[X,Y],Black);
X=X+longDNAlen;
arrowDashedHorizontalRight(ctx,bl,shortDNAlen,[X,Y],bColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+DNAseperate; //Ti showSpeciesName(ctx,"Ti",[X,Y],DNAseperate/2); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,Db,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,b,longDNAlen,[X,Y],bColor); arrowDashedUpRight45(ctx,br,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],bColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+4*DNAseperate; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate;
//waste showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2); up45LeftLine(ctx,a,longDNAlen,[X,Y],aColor); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,ar,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Db,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,bl,shortDNAlen,bColor,[X,Y]);
X=X+shortDNAlen+DNAseperate; showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen);
Y0-=4*DNAseperate; if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; maxX+=2*DNAseperate; maxY=Y+2*DNAseperate; ctx.strokeStyle='rgb('+0+','+0+','+0+')'; ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(X0-DNAseperate,maxY); ctx.moveTo(maxX,maxY); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(maxX,maxY); ctx.lineTo(X0-DNAseperate,maxY); ctx.stroke(); displayStr(ctx,"addition",[X0-DNAseperate,Y0-DNAseperate-fontSpace],Black); return Y;
}
function drawSub(ctx,aName,bName,cName,aColor,bColor,cColor,[X0,Y0],longDNAlen,shortDNAlen){//a+b->c //rectangular var maxX=0,maxY=0; //subtraction var Black=[0,0,0]; X=X0; Y=Y0; var Da="D"+aName; var al=aName+"l"; var a=aName; var ar=aName+"r"; var Db="D"+bName; var bl=bName+"l"; var b=bName; var br=bName+"r"; var Dc="D"+cName; var cl=cName+"l"; var c=cName; var cr=cName+"r";
displayStr(ctx,'input',[X,Y],Black); X+=DNAseperate*fontSpaceRatio; showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); Y0=Y0+4*DNAseperate; Y=Y0; X=X0;
//Line 1 showSpeciesName(ctx,aName,[X,Y]); X=drawSig(ctx,aName,aColor,[X,Y],longDNAlen,shortDNAlen); //Li showSpeciesName(ctx,"Li",[X,Y]); arrowDashedDownLeft45(ctx,al+"*",shortDNAlen,[X,Y+DNAwid],aColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,bl,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep);
X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0; revArrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate; //Hi showSpeciesName(ctx,"Hi",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; horizontalDashedLine(ctx,bl+"*",shortDNAlen,[X,Y+DNAwid],bColor,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep); X=X+arrowCos*shortDNAlen+DNAseperate; Y=Y0; //Bi showSpeciesName(ctx,"Bi",[X,Y]); horizontalLine(ctx,a,longDNAlen,[X,Y],aColor); X=X+longDNAlen; horizontalDashedLine(ctx,ar,longDNAlen,[X,Y],aColor,DNAstep); X=X+shortDNAlen; arrowDashedHorizontalRight(ctx,bl,shortDNAlen,[X,Y],bColor,arrowHeadLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; X=X0; Y=Y0+4*DNAseperate; //Line 2 showSpeciesName(ctx,bName,[X,Y]); X=drawSig(ctx,bName,bColor,[X,Y],longDNAlen,shortDNAlen); //Hi showSpeciesName(ctx,"Hi",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; horizontalDashedLine(ctx,bl+"*",shortDNAlen,[X,Y+DNAwid],bColor,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,br,shortDNAlen,bColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+arrowCos*longDNAlen; Y=Y-arrowSin*longDNAlen; arrowDashedUpRight45(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep); X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+4*DNAseperate; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate; //waste showSpeciesName(ctx,"waste",[X,Y]); up45LeftLine(ctx,Da,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,al,shortDNAlen,aColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,a,longDNAlen,aColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,ar,shortDNAlen,aColor,[X,Y]); X=X+shortDNAlen; up45LeftLine(ctx,Db,longDNAlen,[X,Y],Black); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,bl,shortDNAlen,bColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,b,longDNAlen,bColor,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,br,shortDNAlen,bColor,[X,Y]);
X=X+shortDNAlen+DNAseperate; //Oi showSpeciesName(ctx,"Oi",[X,Y]); horizontalLine(ctx,b,longDNAlen,[X,Y],bColor); X=X+longDNAlen; horizontalDashedLine(ctx,br,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep); if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; X=X0; Y=Y0+8*DNAseperate; //Line 3 //Oi showSpeciesName(ctx,"Oi",[X,Y]); horizontalLine(ctx,b,longDNAlen,[X,Y],bColor); X=X+longDNAlen; horizontalDashedLine(ctx,br,shortDNAlen,[X,Y],bColor,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,Dc,longDNAlen,[X,Y],Black); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,cl,shortDNAlen,[X,Y],cColor,arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen+DNAseperate; //Ti showSpeciesName(ctx,"Ti",[X,Y],DNAseperate/2); arrowDashedDownLeft45(ctx,br+"*",shortDNAlen,[X,Y+DNAwid],bColor,arrowHeadLen,arrowAngle,DNAstep); drawDoubleDNAnoArrow(ctx,Dc,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashednoArrow(ctx,cl,shortDNAlen,cColor,[X,Y]); X=X+shortDNAlen; up45RightLine(ctx,c,longDNAlen,[X,Y],cColor); arrowDashedUpRight45(ctx,cr,shortDNAlen,[X+arrowCos*longDNAlen,Y-arrowSin*longDNAlen],cColor,arrowHeadLen,arrowAngle,DNAstep); X=X+arrowCos*shortDNAlen+DNAseperate*2; Y=Y0+8*DNAseperate; arrowReac(ctx,reacArrowLen,reacArrowHeadLen,[X,Y]);
X=X+reacArrowLen+2*DNAseperate; //waste showSpeciesName(ctx,"waste",[X,Y],DNAseperate/2); up45LeftLine(ctx,b,longDNAlen,[X,Y],bColor); drawDoubleDNADashedwithArrowHorizontalLeft(ctx,br,shortDNAlen,bColor,[X,Y],arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen; drawDoubleDNAnoArrow(ctx,Dc,longDNAlen,Black,[X,Y]); X=X+longDNAlen; drawDoubleDNADashedwithArrowHorizontalRight(ctx,cl,shortDNAlen,cColor,[X,Y]); X=X+shortDNAlen+DNAseperate; showSpeciesName(ctx,cName,[X,Y]); X=drawSig(ctx,cName,cColor,[X,Y],longDNAlen,shortDNAlen);
Y0-=4*DNAseperate; if(X+shortDNAlen>maxX) maxX=X+shortDNAlen; maxX+=2*DNAseperate; maxY=Y+2*DNAseperate; ctx.strokeStyle='rgb('+0+','+0+','+0+')'; ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(X0-DNAseperate,Y0-DNAseperate); ctx.lineTo(X0-DNAseperate,maxY); ctx.moveTo(maxX,maxY); ctx.lineTo(maxX,Y0-DNAseperate); ctx.moveTo(maxX,maxY); ctx.lineTo(X0-DNAseperate,maxY); ctx.stroke(); displayStr(ctx,"subtraction",[X0-DNAseperate,Y0-DNAseperate-fontSpace],Black);
return Y; }
function drawSig(ctx,name,color,[X,Y],longDNAlen,shortDNAlen){ ctx.font = Font; horizontalLine(ctx,"D"+name,longDNAlen,[X,Y],Black); X=X+longDNAlen; horizontalDashedLine(ctx,name+"l",shortDNAlen,[X,Y],color,DNAstep); X=X+shortDNAlen; horizontalLine(ctx,name,longDNAlen,[X,Y],color); X=X+longDNAlen; arrowDashedHorizontalRight(ctx,name+"r",shortDNAlen,[X,Y],color,arrowHeadLen,arrowAngle,DNAstep); X=X+shortDNAlen+DNAseperate; return X; }
function displayStr(ctx,str,[X,Y],[R,G,B]) { ctx.font = FontDescription; ctx.fillStyle='rgb('+R+','+G+','+B+')'; ctx.fillText(str,X,Y); return Y+20; } function drawNeuron(weightNum){ //name
//color dColor=[Math.random()*255,Math.random()*255,Math.random()*255]; xpColor=[Math.random()*255,Math.random()*255,Math.random()*255]; xnColor=[255-xpColor[0],255-xpColor[1],255-xpColor[2]]; yColor=[Math.random()*255,Math.random()*255,Math.random()*255]; ynColor=[255-yColor[0],255-yColor[1],255-yColor[2]]; wasteColor=[0,0,0]; inputpColor=[],inputnColor=[]; inputpBkpColor=[],inputnBkpColor=[]; wi0pColor=[],wi0nColor=[]; wipColor=[],winColor=[]; for(var i=1;i<=weightNum;i=i+1){ wi0p.push("w"+i+"0+"); wi0n.push("w"+i+"0-"); wip.push("w"+i+"+"); win.push("w"+i+"-");
wi0pColor.push([Math.random()*255,Math.random()*255,Math.random()*255]); wi0nColor.push([255-wi0pColor[i-1][0],255-wi0pColor[i-1][1],255-wi0pColor[i-1][2]]); wipColor.push([Math.random()*255,Math.random()*255,Math.random()*255]); winColor.push([255-wipColor[i-1][0],255-wipColor[i-1][1],255-wipColor[i-1][2]]);
inputp.push("i"+i+"+"); inputn.push("i"+i+"-"); inputpColor.push([Math.random()*255,Math.random()*255,Math.random()*255]); inputnColor.push([255-inputpColor[i-1][0],255-inputpColor[i-1][1],255-inputpColor[i-1][2]]);
inputpBkp.push("ib"+i+"+"); inputnBkp.push("ib"+i+"-"); inputpBkpColor.push([Math.random()*255,Math.random()*255,Math.random()*255]); inputnBkpColor.push([255-inputpBkpColor[i-1][0],255-inputpBkpColor[i-1][1],255-inputpBkpColor[i-1][2]]); } genSeq(weightNum); } function genSeq(weightNum){ //weighted sum for(var i=1;i<=weightNum;i=i+1){ seqDict=multiplicationReLU(seqDict,inputpBkp[i-1],wip[i-1],xp,y,inputpBkpColor[i-1],wipColor[i-1],xpColor,yColor); seqDict=multiplicationReLU(seqDict,inputnBkp[i-1],wip[i-1],xn,yn,inputnBkpColor[i-1],wipColor[i-1],xnColor,ynColor); seqDict=multiplicationReLU(seqDict,inputpBkp[i-1],win[i-1],xn,yn,inputpBkpColor[i-1],winColor[i-1],xnColor,ynColor); seqDict=multiplicationReLU(seqDict,inputnBkp[i-1],win[i-1],xp,y,inputnBkpColor[i-1],winColor[i-1],xpColor,yColor); } //subtraction seqDict=subtraction(seqDict,xp,xn,waste,xpColor,xnColor,wasteColor); seqDict=subtraction(seqDict,y,yn,waste,yColor,ynColor,wasteColor); //backpropagation for(var i=1;i<=weightNum;i=i+1){ seqDict=multiplication(seqDict,xp,inputp[i-1],wi0n[i-1],xpColor,inputpColor[i-1],wi0nColor[i-1]); seqDict=multiplication(seqDict,xp,inputn[i-1],wi0n[i-1],xpColor,inputnColor[i-1],wi0nColor[i-1]); } for(var i=1;i<=weightNum;i=i+1){ seqDict=add(seqDict,wi0p[i-1],wip[i-1],waste,wi0pColor[i-1],wipColor[i-1],wasteColor); seqDict=add(seqDict,wi0n[i-1],win[i-1],waste,wi0nColor[i-1],winColor[i-1],wasteColor); seqDict=add(seqDict,wip[i-1],win[i-1],waste,wipColor[i-1],winColor[i-1],wasteColor); } } function drawWeightedSum([X0,Y0]){ X=X0; Y=Y0; //Y=displayStr(ctx,"Weighted sum:",[X,Y],Black); //weighted sum //var weightNum=document.getElementById("number").value; setCanvans(Y0+weightNum*4*18*DNAseperate+weightNum*4*4*DNAseperate-2*DNAseperate); var ctx = document.getElementById('canvas').getContext('2d'); for(var i=1;i<=weightNum;i=i+1){ Y=drawMulReLU(ctx,inputpBkp[i-1],wip[i-1],xp,y,inputpBkpColor[i-1],wipColor[i-1],xpColor,yColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; Y=drawMulReLU(ctx,inputnBkp[i-1],wip[i-1],xn,yn,inputnBkpColor[i-1],wipColor[i-1],xnColor,ynColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; Y=drawMulReLU(ctx,inputpBkp[i-1],win[i-1],xn,yn,inputpBkpColor[i-1],winColor[i-1],xnColor,ynColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; Y=drawMulReLU(ctx,inputnBkp[i-1],win[i-1],xp,y,inputnBkpColor[i-1],winColor[i-1],xpColor,yColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; } // for(var i=1;i<=weightNum;i=i+1){ // seqDict=multiplicationReLU(seqDict,inputpBkp[i-1],wip[i-1],xp,y,inputpBkpColor[i-1],wipColor[i-1],xpColor,yColor); // seqDict=multiplicationReLU(seqDict,inputnBkp[i-1],wip[i-1],xn,yn,inputnBkpColor[i-1],wipColor[i-1],xnColor,ynColor); // seqDict=multiplicationReLU(seqDict,inputpBkp[i-1],win[i-1],xn,yn,inputpBkpColor[i-1],winColor[i-1],xnColor,ynColor); // seqDict=multiplicationReLU(seqDict,inputnBkp[i-1],win[i-1],xp,y,inputnBkpColor[i-1],winColor[i-1],xpColor,yColor); // } } function drawSubNeuron([X0,Y0]){ X=X0; Y=Y0; setCanvans(Y0+2*14*DNAseperate+2*4*DNAseperate-2*DNAseperate); var ctx = document.getElementById('canvas').getContext('2d'); Y=drawSub(ctx,xp,xn,waste,xpColor,xnColor,wasteColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; // seqDict=subtraction(seqDict,xp,xn,waste,xpColor,xnColor,wasteColor); X=X0; //y + y^- -> \phi //Y=displayStr(ctx,"y + y- -> waste",[X,Y],Black); X=X0; Y=drawSub(ctx,y,yn,waste,yColor,ynColor,wasteColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; // seqDict=subtraction(seqDict,y,yn,waste,yColor,ynColor,wasteColor); X=X0; }
function drawBackprop([X0,Y0]){ //backpropagation //var weightNum=document.getElementById("number").value; setCanvans(Y0+weightNum*2*18*DNAseperate+weightNum*2*4*DNAseperate+weightNum*34*DNAseperate+weightNum*3*4*DNAseperate-2*DNAseperate); var ctx = document.getElementById('canvas').getContext('2d'); X=X0; Y=Y0; for(var i=1;i<=weightNum;i=i+1){ Y=drawMul(ctx,xp,inputp[i-1],wi0n[i-1],xpColor,inputpColor[i-1],wi0nColor[i-1],[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; Y=drawMul(ctx,xp,inputn[i-1],wi0n[i-1],xpColor,inputnColor[i-1],wi0pColor[i-1],[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; } // for(var i=1;i<=weightNum;i=i+1){ // seqDict=multiplication(seqDict,xp,inputp[i-1],wi0n[i-1],xpColor,inputpColor[i-1],wi0nColor[i-1]); // seqDict=multiplication(seqDict,xp,inputn[i-1],wi0n[i-1],xpColor,inputnColor[i-1],wi0nColor[i-1]); // }
//wi0p->wip, wi0n->win, wip + win -> \phi for(var i=1;i<=weightNum;i=i+1){ Y=drawAdd(ctx,wi0p[i-1],wip[i-1],wi0pColor[i-1],wipColor[i-1],[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; Y=drawAdd(ctx,wi0n[i-1],win[i-1],wi0nColor[i-1],winColor[i-1],[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; Y=drawSub(ctx,wip[i-1],win[i-1],waste,wipColor[i-1],winColor[i-1],wasteColor,[X,Y],longDNAlen,shortDNAlen)+4*DNAseperate; X=X0; } // for(var i=1;i<=weightNum;i=i+1){ // seqDict=add(seqDict,wi0p[i-1],wip[i-1],waste,wi0pColor[i-1],wipColor[i-1],wasteColor); // seqDict=add(seqDict,wi0n[i-1],win[i-1],waste,wi0nColor[i-1],winColor[i-1],wasteColor); // seqDict=add(seqDict,wip[i-1],win[i-1],waste,wipColor[i-1],winColor[i-1],wasteColor); // } }
// return seqDict;
///////////////////////////////sequence design////////////////////////////////////////////////////// function zeros(num){ var z=[]; for (var i = 0; i < num; i++) { z.push(0); } return z; }
function change(a){ var chain=; for(var i=0;i<a.length;i++){ if(a[i]==0) chain+=; if(a[i]==1) chain+='A'; if(a[i]==2) chain+='T'; if(a[i]==3) chain+='C'; if(a[i]==4) chain+='G'; } return chain; }
function check(a,b){ var i; var Original1=[]; n=a.length; if(b==1){ for(i=3;i<n-3;i++){ if(a[i]==1 && a[i-1]==1 && a[i-2]==1 && a[i-3]==1) a[i]=randsrc([2,3],[0.5,0.5]); if(a[i]==2 && a[i-1]==2 && a[i-2]==2 && a[i-3]==2) a[i]=randsrc([1,3],[0.5,0.5]); if(a[i]==3 && a[i-1]==3 && a[i-2]==3) a[i]=randsrc([1,2],[0.5,0.5]); } if(a[n-5]==1 && a[n-4]==1 && a[n-3]==1) a[n-4]=randsrc([2,3],[0.5,0.5]); } if(b==2){ for(i=2;i<n-1;i++){ if(i==2){ if(a[i]==3 && a[i-1]==3 && a[i-2]==3) a[i]=randsrc([1,2],[0.5,0.5]); } if (i>2){ if(a[i]==1 && a[i-1]==1 && a[i-2]==1 && a[i-3]==1) a[i]=randsrc([2,3],[0.5,0.5]); if(a[i]==2 && a[i-1]==2 && a[i-2]==2 && a[i-3]==2) a[i]=randsrc([1,3],[0.5,0.5]); if(a[i]==3 && a[i-1]==3 && a[i-2]==3) a[i]=randsrc([1,2],[0.5,0.5]); } } } for(i=0;i<n;i++) Original1.push(a[i]); return Original1; }
function creatComplementary(Original0){
var Complementary0=[];
for(var i=0;i<Original0.length;i++){
if(Original0[i]==1)
Complementary0.push(2);
if(Original0[i]==2) Complementary0.push(1); if(Original0[i]==3) Complementary0.push(4); } return Complementary0; }
function randsrc(entry,prob){
var r=Math.random();
var totalP=prob[0];
var i;
for(i=1;i<entry.length;i++){
if(r<=totalP)
return entry[i-1];
totalP+=prob[i];
}
return entry[i-1];
}
function creatlongchain(a){ var longchain0=[],longchain0_=[]; var i; for(i=0;i<a;i++){ longchain0.push(randsrc([1,2,3],[0.15,0.15,0.7])); } longchain0[0]=1; longchain0[1]=3; longchain0[a-2]=1; longchain0[a-1]=3; longchain0=check(longchain0,1); longchain0_=creatComplementary(longchain0); return [longchain0,longchain0_]; }
function creatshortchain(){ var core=[],t=randsrc([0,1,2],[1/3,1/3,1/3]),clamp=[1,3]; var shortchain_l=[0,0,0,0,0],shortchain_l_=[0,0,0,0,0],shortchain_r=[0,0,0,0,0],shortchain_r_=[0,0,0,0,0]; var i; for(i=0;i<3;i++){ core.push(randsrc([1,2],[0.5,0.5])); } core[t]=3; shortchain_l[0]=clamp[0]; shortchain_l[1]=clamp[1]; shortchain_l[2]=core[0]; shortchain_l[3]=core[1]; shortchain_l[4]=core[2];
shortchain_r[0]=core[0]; shortchain_r[1]=core[1]; shortchain_r[2]=core[2]; shortchain_r[3]=clamp[0]; shortchain_r[4]=clamp[1];
shortchain_l_=creatComplementary(shortchain_l); shortchain_r_=creatComplementary(shortchain_r); return [shortchain_l,shortchain_l_,shortchain_r,shortchain_r_]; }
//////////////////////////////////////
function rgb2hex(color){
//var arr=rgb; var hexStr="#"+num2hex(color[0])+num2hex(color[1])+num2hex(color[2]); return hexStr.toUpperCase();
} function num2hex(x){
return ("0" + parseInt(x).toString(16)).slice(-2);
} function add(dict,aName,bName,cName,aColor,bColor,cColor){//dict:[[<species name>s],[Da,al,a,ar,Da*,al*,a*,ar*],[...],...] var Da,Da_,Db,Db_,Dc,Dc_,a,a_,b,b_,c,c_;//long chain var al,al_,ar,ar_,bl,bl_,br,br_,cl,cl_,cr,cr_;//short chain [Da,Da_]=creatlongchain(15); [Db,Db_]=creatlongchain(15); [Dc,Dc_]=creatlongchain(15); [a,a_]=creatlongchain(15); [b,b_]=creatlongchain(15); [c,c_]=creatlongchain(15); [al,al_,ar,ar_]=creatshortchain(); [bl,bl_,br,br_]=creatshortchain(); [cl,cl_,cr,cr_]=creatshortchain(); if(!findNameinDict(aName,dict[0])){ dict[0].push(aName); dict.push([Da,al,a,ar,Da_,al_,a_,ar_]); } else{ Da=dict[getIndex(aName,dict[0])+1][0]; al=dict[getIndex(aName,dict[0])+1][1]; a=dict[getIndex(aName,dict[0])+1][2]; ar=dict[getIndex(aName,dict[0])+1][3]; Da_=dict[getIndex(aName,dict[0])+1][4]; al_=dict[getIndex(aName,dict[0])+1][5]; a_=dict[getIndex(aName,dict[0])+1][6]; ar_=dict[getIndex(aName,dict[0])+1][7]; } if(!findNameinDict(bName,dict[0])){ dict[0].push(bName); dict.push([Db,bl,b,br,Db_,bl_,b_,br_]); } else{ Db=dict[getIndex(bName,dict[0])+1][0]; bl=dict[getIndex(bName,dict[0])+1][1]; b=dict[getIndex(bName,dict[0])+1][2]; br=dict[getIndex(bName,dict[0])+1][3]; Db_=dict[getIndex(bName,dict[0])+1][4]; bl_=dict[getIndex(bName,dict[0])+1][5]; b_=dict[getIndex(bName,dict[0])+1][6]; br_=dict[getIndex(bName,dict[0])+1][7]; } if(!findNameinDict(cName,dict[0])){ dict[0].push(cName); dict.push([Dc,cl,c,cr,Dc_,cl_,c_,cr_]); } else{ Dc=dict[getIndex(cName,dict[0])+1][0]; cl=dict[getIndex(cName,dict[0])+1][1]; c=dict[getIndex(cName,dict[0])+1][2]; cr=dict[getIndex(cName,dict[0])+1][3]; Dc_=dict[getIndex(cName,dict[0])+1][4]; cl_=dict[getIndex(cName,dict[0])+1][5]; c_=dict[getIndex(cName,dict[0])+1][6]; cr_=dict[getIndex(cName,dict[0])+1][7]; } /////////////////////////////////////////////////////// /// seqFile.push("*************************addition*************************\n"); seqFile.push("************input signal************\n") seqFile.push("ai: " +change(Da) + change(al) + change(a) + change(ar) +"\n"); seqFile.push("************double stranded DNA************\n"); seqFile.push("Gi_up: " + change(a) + change(ar) + change(Db) + change(bl) + change(Dc) + change(cl) +"\n"); seqFile.push("Gi_down: " + (change(al_) + change(a_) + change(ar_)).split().reverse().join() +"\n"); seqFile.push("************double stranded DNA************\n") seqFile.push("Ti_up1: " + change(Db) + change(bl) + change(b) + change(br) +"\n"); seqFile.push("Ti_up2: " + change(Dc) + change(cl) + change(c) + change(cr) +"\n"); seqFile.push("Ti_down: " + (change(al_) + change(Db_) + change(bl_) + change(Dc_) + change(cl_)).split().reverse().join() + "\n");
lis.push("return dict; }
function multiplication(dict,aName,bName,cName,aColor,bColor,cColor){
var Da,Da_,Db,Db_,Dc,Dc_,a,a_,b,b_,c,c_;//long chain
var al,al_,ar,ar_,bl,bl_,br,br_,cl,cl_,cr,cr_;//short chain
[Da,Da_]=creatlongchain(15);
[Db,Db_]=creatlongchain(15);
[Dc,Dc_]=creatlongchain(15);
[a,a_]=creatlongchain(15);
[b,b_]=creatlongchain(15);
[c,c_]=creatlongchain(15);
[al,al_,ar,ar_]=creatshortchain();
[bl,bl_,br,br_]=creatshortchain();
[cl,cl_,cr,cr_]=creatshortchain();
if(!findNameinDict(aName,dict[0])){
dict[0].push(aName);
dict.push([Da,al,a,ar,Da_,al_,a_,ar_]);
}
else{
Da=dict[getIndex(aName,dict[0])+1][0];
al=dict[getIndex(aName,dict[0])+1][1];
a=dict[getIndex(aName,dict[0])+1][2];
ar=dict[getIndex(aName,dict[0])+1][3];
Da_=dict[getIndex(aName,dict[0])+1][4];
al_=dict[getIndex(aName,dict[0])+1][5];
a_=dict[getIndex(aName,dict[0])+1][6];
ar_=dict[getIndex(aName,dict[0])+1][7];
}
if(!findNameinDict(bName,dict[0])){
dict[0].push(bName);
dict.push([Db,bl,b,br,Db_,bl_,b_,br_]);
}
else{
Db=dict[getIndex(bName,dict[0])+1][0];
bl=dict[getIndex(bName,dict[0])+1][1];
b=dict[getIndex(bName,dict[0])+1][2];
br=dict[getIndex(bName,dict[0])+1][3];
Db_=dict[getIndex(bName,dict[0])+1][4];
bl_=dict[getIndex(bName,dict[0])+1][5];
b_=dict[getIndex(bName,dict[0])+1][6];
br_=dict[getIndex(bName,dict[0])+1][7];
}
if(!findNameinDict(cName,dict[0])){
dict[0].push(cName);
dict.push([Dc,cl,c,cr,Dc_,cl_,c_,cr_]);
}
else{
Dc=dict[getIndex(cName,dict[0])+1][0];
cl=dict[getIndex(cName,dict[0])+1][1];
c=dict[getIndex(cName,dict[0])+1][2];
cr=dict[getIndex(cName,dict[0])+1][3];
Dc_=dict[getIndex(cName,dict[0])+1][4];
cl_=dict[getIndex(cName,dict[0])+1][5];
c_=dict[getIndex(cName,dict[0])+1][6];
cr_=dict[getIndex(cName,dict[0])+1][7];
}
/////////////////////////////////////////////////////////
seqFile.push("*************************multiplication*************************\n");
seqFile.push("************input signal************\n")
seqFile.push("ai: " + change(Da) + change(al) + change(a) + change(ar) +"\n");
seqFile.push("bi: " + change(Db) + change(bl) + change(b) + change(br) +"\n");
seqFile.push("************double stranded DNA************\n"); seqFile.push("Wi_up:" + change(a) + change(ar) +"\n"); seqFile.push("Wi_down:" + change(ar_).split().reverse().join() + change(a_).split().reverse().join() + change(al_).split().reverse().join() +"\n");
seqFile.push("************double stranded DNA************\n"); seqFile.push("Li_up1: " + change(a) + change(ar) + change(bl) +"\n"); seqFile.push("Li_up2: " + change(b) + change(br) + change(Da) + change(al) + change(Db) + change(bl) + change(Dc) + change(cl) +"\n"); seqFile.push("Li_down: " + (change(al_) + change(a_) + change(ar_) + change(bl_) + change(b_) + change(br_)).split().reverse().join() +"\n");
seqFile.push("************auxiliary single stranded DNA************\n"); seqFile.push("Bi: " + change(a) + change(ar) + change(bl) +"\n");
seqFile.push("************double stranded DNA************\n"); seqFile.push("Ti_up1: " + change(Da) + change(al) + change(a) + change(ar) +"\n"); seqFile.push("Ti_up2: " + change(Db) + change(bl) + change(b) + change(br) +"\n"); seqFile.push("Ti_up3: " + change(Dc) + change(cl) + change(c) + change(cr) +"\n"); seqFile.push("Ti_down: " + (change(br_) + change(Da_) + change(al_) + change(Db_) + change(bl_) + change(Dc_) + change(cl_)).split().reverse().join() + "\n");
return dict; }
function subtraction(dict,aName,bName,cName,aColor,bColor,cColor){ var Da,Da_,Db,Db_,Dc,Dc_,a,a_,b,b_,c,c_;//long chain var al,al_,ar,ar_,bl,bl_,br,br_,cl,cl_,cr,cr_;//short chain [Da,Da_]=creatlongchain(15); [Db,Db_]=creatlongchain(15); [Dc,Dc_]=creatlongchain(15); [a,a_]=creatlongchain(15); [b,b_]=creatlongchain(15); [c,c_]=creatlongchain(15); [al,al_,ar,ar_]=creatshortchain(); [bl,bl_,br,br_]=creatshortchain(); [cl,cl_,cr,cr_]=creatshortchain(); if(!findNameinDict(aName,dict[0])){ dict[0].push(aName); dict.push([Da,al,a,ar,Da_,al_,a_,ar_]); } else{ Da=dict[getIndex(aName,dict[0])+1][0]; al=dict[getIndex(aName,dict[0])+1][1]; a=dict[getIndex(aName,dict[0])+1][2]; ar=dict[getIndex(aName,dict[0])+1][3]; Da_=dict[getIndex(aName,dict[0])+1][4]; al_=dict[getIndex(aName,dict[0])+1][5]; a_=dict[getIndex(aName,dict[0])+1][6]; ar_=dict[getIndex(aName,dict[0])+1][7]; } if(!findNameinDict(bName,dict[0])){ dict[0].push(bName); dict.push([Db,bl,b,br,Db_,bl_,b_,br_]); } else{ Db=dict[getIndex(bName,dict[0])+1][0]; bl=dict[getIndex(bName,dict[0])+1][1]; b=dict[getIndex(bName,dict[0])+1][2]; br=dict[getIndex(bName,dict[0])+1][3]; Db_=dict[getIndex(bName,dict[0])+1][4]; bl_=dict[getIndex(bName,dict[0])+1][5]; b_=dict[getIndex(bName,dict[0])+1][6]; br_=dict[getIndex(bName,dict[0])+1][7]; } if(!findNameinDict(cName,dict[0])){ dict[0].push(cName); dict.push([Dc,cl,c,cr,Dc_,cl_,c_,cr_]); } else{ Dc=dict[getIndex(cName,dict[0])+1][0]; cl=dict[getIndex(cName,dict[0])+1][1]; c=dict[getIndex(cName,dict[0])+1][2]; cr=dict[getIndex(cName,dict[0])+1][3]; Dc_=dict[getIndex(cName,dict[0])+1][4]; cl_=dict[getIndex(cName,dict[0])+1][5]; c_=dict[getIndex(cName,dict[0])+1][6]; cr_=dict[getIndex(cName,dict[0])+1][7]; } ///////////////////////////////////////////////////////// seqFile.push("*************************subtraction*************************\n"); seqFile.push("************input signal************\n") seqFile.push("ai: " + change(Da) + change(al) + change(a) + change(ar) +"\n"); seqFile.push("bi: " + change(Db) + change(bl) + change(b) + change(br) +"\n"); seqFile.push("************double stranded DNA************\n");
seqFile.push("Li_up1: " + change(a) + change(ar) + change(bl) +"\n");
seqFile.push("Li_up2: " + change(b) + change(br) + change(Dc) + change(cl) +"\n");
seqFile.push("Li_down:" + (change(al_) + change(a_) + change(ar_) + change(bl_) + change(b_) + change(br_)).split().reverse().join() +"\n"); seqFile.push("************auxiliary single stranded DNA************\n"); seqFile.push("Bi:" + change(a) + change(ar) + change(bl) +"\n"); seqFile.push("************double stranded DNA************\n"); seqFile.push("Ti_up: " + change(Dc) + change(cl) + change(c) + change(cr) +"\n"); seqFile.push("Ti_down: " + (change(br_) + change(Dc_) + change(cl_)).split().reverse().join() + "\n");
return dict; }
function multiplicationReLU(dict,aName,bName,cName,dName,aColor,bColor,cColor,dcolor){ var Da,Da_,Db,Db_,Dc,Dc_,Dd,Dd_,a,a_,b,b_,c,c_,d,d_;//long chain var al,al_,ar,ar_,bl,bl_,br,br_,cl,cl_,cr,cr_,dl,dl_,dr,dr_;//short chain [Da,Da_]=creatlongchain(15); [Db,Db_]=creatlongchain(15); [Dc,Dc_]=creatlongchain(15); [Dd,Dd_]=creatlongchain(15); [a,a_]=creatlongchain(15); [b,b_]=creatlongchain(15); [c,c_]=creatlongchain(15); [d,d_]=creatlongchain(15); [al,al_,ar,ar_]=creatshortchain(); [bl,bl_,br,br_]=creatshortchain(); [cl,cl_,cr,cr_]=creatshortchain(); [dl,dl_,dr,dr_]=creatshortchain(); if(!findNameinDict(aName,dict[0])){ dict[0].push(aName); dict.push([Da,al,a,ar,Da_,al_,a_,ar_]); } else{ Da=dict[getIndex(aName,dict[0])+1][0]; al=dict[getIndex(aName,dict[0])+1][1]; a=dict[getIndex(aName,dict[0])+1][2]; ar=dict[getIndex(aName,dict[0])+1][3]; Da_=dict[getIndex(aName,dict[0])+1][4]; al_=dict[getIndex(aName,dict[0])+1][5]; a_=dict[getIndex(aName,dict[0])+1][6]; ar_=dict[getIndex(aName,dict[0])+1][7]; } if(!findNameinDict(bName,dict[0])){ dict[0].push(bName); dict.push([Db,bl,b,br,Db_,bl_,b_,br_]); } else{ Db=dict[getIndex(bName,dict[0])+1][0]; bl=dict[getIndex(bName,dict[0])+1][1]; b=dict[getIndex(bName,dict[0])+1][2]; br=dict[getIndex(bName,dict[0])+1][3]; Db_=dict[getIndex(bName,dict[0])+1][4]; bl_=dict[getIndex(bName,dict[0])+1][5]; b_=dict[getIndex(bName,dict[0])+1][6]; br_=dict[getIndex(bName,dict[0])+1][7]; } if(!findNameinDict(cName,dict[0])){ dict[0].push(cName); dict.push([Dc,cl,c,cr,Dc_,cl_,c_,cr_]); } else{ Dc=dict[getIndex(cName,dict[0])+1][0]; cl=dict[getIndex(cName,dict[0])+1][1]; c=dict[getIndex(cName,dict[0])+1][2]; cr=dict[getIndex(cName,dict[0])+1][3]; Dc_=dict[getIndex(cName,dict[0])+1][4]; cl_=dict[getIndex(cName,dict[0])+1][5]; c_=dict[getIndex(cName,dict[0])+1][6]; cr_=dict[getIndex(cName,dict[0])+1][7]; } if(!findNameinDict(dName,dict[0])){ dict[0].push(dName); dict.push([Dd,dl,d,dr,Dd_,dl_,d_,dr_]); } else{ Dd=dict[getIndex(dName,dict[0])+1][0]; dl=dict[getIndex(dName,dict[0])+1][1]; d=dict[getIndex(dName,dict[0])+1][2]; dr=dict[getIndex(dName,dict[0])+1][3]; Dd_=dict[getIndex(dName,dict[0])+1][4]; dl_=dict[getIndex(dName,dict[0])+1][5]; d_=dict[getIndex(dName,dict[0])+1][6]; dr_=dict[getIndex(dName,dict[0])+1][7]; } ///////////////////////////////////////////////////////// seqFile.push("*************************multiplication*************************\n"); seqFile.push("************input signal************\n") seqFile.push("ai: " + change(Da) + change(al) + change(a) + change(ar) +"\n"); seqFile.push("bi: " + change(Db) + change(bl) + change(b) + change(br) +"\n");
seqFile.push("************double stranded DNA************\n"); seqFile.push("Wi_up:" + change(a) + change(ar) +"\n"); seqFile.push("Wi_down:" + change(ar_).split().reverse().join() + change(a_).split().reverse().join() + change(al_).split().reverse().join() + "\n");
seqFile.push("************double stranded DNA************\n"); seqFile.push("Li_up1: " + change(a) + change(ar) + change(bl) + "\n"); seqFile.push("Li_up2: " + change(b) + change(br) + change(Da) + change(al) + change(Db) + change(bl) + change(Dc) + change(cl) + change(Dd) + change(dl) + "\n"); seqFile.push("Li_down: " + (change(al_) + change(a_) + change(ar_) + change(bl_) + change(b_) + change(br_)).split().reverse().join() +"\n");
seqFile.push("************auxiliary single stranded DNA************\n"); seqFile.push("Bi: " + change(a) + change(ar) + change(bl) +"\n");
seqFile.push("************double stranded DNA************\n"); seqFile.push("Ti_up1: " + change(Da) + change(al) + change(a) + change(ar) +"\n"); seqFile.push("Ti_up2: " + change(Db) + change(bl) + change(b) + change(br) +"\n"); seqFile.push("Ti_up3: " + change(Dc) + change(cl) + change(c) + change(cr) +"\n"); seqFile.push("Ti_up4: " + change(Dd) + change(dl) + change(d) + change(dr) +"\n"); seqFile.push("Ti_down: " + (change(br_) + change(Da_) + change(al_) + change(Db_) + change(bl_) + change(Dc_) + change(cl_) + change(Dd_) + change(dl_)).split().reverse().join() + "\n");
lis.push("return dict; } ////////////////////tools///////////////////////////////////////////////// function findNameinDict(name,dict0){ for(var i=0;i<dict0.length;i=i+1){
//console.log(dict0[i]);
if(dict0[i]==name) return true; } return false; } function getIndex(element,lis){ for(var i=0;i<lis.length;i=i+1){ if(element==lis[i]) return i; } return -1; }